Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC245028.1-201ENST00000423259 256 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AL590762.4-201ENST00000425885 253 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC006989.1-201ENST00000427212 131 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 IPO7P1-201ENST00000442031 636 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC010326.1-201ENST00000462726 602 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC109327.1-201ENST00000471666 403 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC025465.3-201ENST00000510570 311 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC108043.1-201ENST00000512696 574 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 SNORA64.4-201ENST00000516632 81 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 DEFB131C-201ENST00000528817 165 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC233702.2-202ENST00000562547 291 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC023824.2-201ENST00000566185 400 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 MYL12BP1-201ENST00000569826 507 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AP005019.3-201ENST00000620418 560 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 MIR8062-201ENST00000621515 85 ntBASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLRN3Q8NCR9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 SNORA58B-201ENST00000364259 136 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 RNA5SP366-201ENST00000365454 123 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 MIR95-201ENST00000385072 81 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 RNA5SP397-201ENST00000391323 118 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 AL033519.2-201ENST00000403958 392 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 AC090515.1-201ENST00000465295 476 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 RPL26P26-201ENST00000480251 434 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 RN7SL690P-201ENST00000582087 240 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 MIR3117-201ENST00000584034 78 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 AC004832.5-201ENST00000608677 401 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 FAM35CP-201ENST00000554755 2470 ntBASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLRN3Q8NCR9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.143-201ENST00000363520 106 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 RNU6-727P-201ENST00000363592 107 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 RNU6-944P-201ENST00000364023 107 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 RNU6-702P-201ENST00000364982 107 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 RNU6-220P-201ENST00000390919 107 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 AL390729.2-201ENST00000416137 156 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 Z96811.1-201ENST00000445880 108 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 LINC01399-202ENST00000458450 244 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 RNU6-625P-201ENST00000459412 107 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 SNORA48.11-201ENST00000517015 89 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 AC245166.1-201ENST00000521012 253 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 AP003733.2-201ENST00000529409 171 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 MIR6780A-201ENST00000615089 68 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 AC091953.3-201ENST00000623220 236 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 AC068205.3-201ENST00000636385 468 ntBASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLRN3Q8NCR9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 SNORD56.3-201ENST00000363507 71 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.193-201ENST00000363979 102 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 SNORD113.2-201ENST00000364166 89 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.230-201ENST00000364348 109 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 Y_RNA.401-201ENST00000383965 117 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 SNORD63-201ENST00000384262 68 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 RPS16P5-201ENST00000406501 404 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 RNU5A-5P-201ENST00000411054 116 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 AC093578.1-201ENST00000415219 368 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 AL157831.1-201ENST00000426134 473 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 RPL23AP46-201ENST00000438548 490 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 RNU6-408P-201ENST00000515910 100 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 MIR4443-201ENST00000585052 53 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 AC023043.3-201ENST00000593113 385 ntBASIC3.01□□□□□ -1.93
CLRN3Q8NCR9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms