Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
NANOGP1Q8N7R0 LINC02555-201ENST00000563933 1951 ntBASIC2.76□□□□□ -1.97
NANOGP1Q8N7R0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NANOGP1Q8N7R0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
NANOGP1Q8N7R0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 SNORD56.1-201ENST00000362913 68 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 SNORD115-32-201ENST00000364079 82 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 U8.10-201ENST00000384260 133 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 Y_RNA.478-201ENST00000384358 107 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-1035P-201ENST00000384477 107 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 MIR32-201ENST00000384965 70 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AL357075.1-201ENST00000404107 726 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AL591043.1-201ENST00000432461 424 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC004383.1-201ENST00000438135 289 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 RPS29P6-201ENST00000438196 145 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AL353705.4-201ENST00000449661 238 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AP000870.1-201ENST00000472927 406 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC106707.2-201ENST00000484182 374 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 MRPL42P6-201ENST00000486397 371 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC097462.2-201ENST00000504623 481 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-581P-201ENST00000516214 105 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 MIR2355-201ENST00000517199 87 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC022868.1-201ENST00000517767 391 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC093023.1-201ENST00000547375 507 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 MIR4659A-201ENST00000580269 81 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AL365434.2-201ENST00000607979 234 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 RMST_6.1-201ENST00000611980 203 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 MIR376A1-201ENST00000616574 68 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 AC006111.3-201ENST00000622137 383 ntBASIC2.75□□□□□ -1.97
NANOGP1Q8N7R0 Z83843.1-201ENST00000604070 3685 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC090740.1-201ENST00000623193 2262 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 SNORD27-201ENST00000363981 72 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-200P-201ENST00000364743 107 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AL359837.1-201ENST00000381357 287 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 SNORA36A-201ENST00000384221 132 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-937P-201ENST00000384325 106 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 Y_RNA.581-201ENST00000391017 97 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 RNU1-139P-201ENST00000391307 165 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AL603910.2-201ENST00000407268 136 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 BPY2DP-201ENST00000422208 265 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC016700.2-201ENST00000446011 156 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 HMGN2P10-201ENST00000448085 265 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC087477.1-201ENST00000465747 340 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 RNA5SP76-201ENST00000516277 87 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 RNU1-95P-201ENST00000516357 160 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 RNU1-128P-201ENST00000516704 160 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC027288.2-201ENST00000553028 243 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AL391261.3-201ENST00000557194 520 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC136624.4-201ENST00000573044 370 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 MIR4643-201ENST00000577473 78 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 AC009779.6-201ENST00000603972 165 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 HSPE1P7-201ENST00000604681 321 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.74□□□□□ -1.97
NANOGP1Q8N7R0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 AL391987.6-201ENST00000305671 199 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RNA5SP361-201ENST00000362686 118 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RNY1-201ENST00000364228 113 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RNU1-140P-201ENST00000365040 165 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-209P-201ENST00000384118 107 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 SNORA11B-201ENST00000408175 129 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 NDUFS5P4-201ENST00000412983 318 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 AL451074.5-201ENST00000415894 435 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RPL37P4-201ENST00000448908 268 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RPS23P5-201ENST00000495419 428 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-496P-201ENST00000516145 99 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 RN7SKP272-201ENST00000516988 232 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 AC007224.1-201ENST00000564410 144 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 MIR5571-201ENST00000577998 113 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 MIR4443-201ENST00000585052 53 ntBASIC2.73□□□□□ -1.97
NANOGP1Q8N7R0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.72□□□□□ -1.97
NANOGP1Q8N7R0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms