Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SNORA70.2-201ENST00000364506 135 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 U1.1-201ENST00000384101 164 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-22P-201ENST00000384355 107 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 MIR548B-201ENST00000385247 97 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-855P-201ENST00000410395 104 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 EIF4EP4-201ENST00000424916 578 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 AC016831.4-201ENST00000438302 307 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 AC079168.2-201ENST00000453977 416 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 AC091153.1-201ENST00000466297 402 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 AP001880.2-201ENST00000538233 448 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 CYP4A43P-201ENST00000568156 121 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 MIR4284-201ENST00000578924 81 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 AL670379.2-201ENST00000604983 252 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 AC091895.1-201ENST00000624494 256 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 MFSD8-242ENST00000641690 4199 ntBASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
DEPDC4Q8N2C3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AF127577.6-201ENST00000623352 2191 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AC079741.1-201ENST00000321498 212 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 RNU1-15P-201ENST00000353977 144 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 RNA5SP151-201ENST00000365632 117 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 RNU1-82P-201ENST00000390851 165 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AL645608.4-201ENST00000423619 154 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AC073264.2-201ENST00000448886 166 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 RN7SL354P-201ENST00000469282 294 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 SNORD116-25-201ENST00000516517 92 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 IFITM8P-201ENST00000522529 394 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AP006289.1-201ENST00000538089 277 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AC099778.2-201ENST00000610904 211 ntBASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
DEPDC4Q8N2C3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 RNA5SP505-201ENST00000364748 108 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 Y_RNA.293-201ENST00000364908 93 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-144P-201ENST00000383951 107 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-417P-201ENST00000384712 107 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 MIR93-201ENST00000385024 80 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 MIR616-201ENST00000385293 97 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 SNORA48.5-201ENST00000391143 135 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 Y_RNA.586-201ENST00000391146 98 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 U3.30-201ENST00000391308 210 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 Z98745.1-201ENST00000402553 494 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 HMGN2P31-201ENST00000432430 273 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AC010409.1-201ENST00000487382 476 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 RN7SL812P-201ENST00000493791 279 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AC107027.2-201ENST00000512197 115 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 PARP1P2-201ENST00000556806 195 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AC022655.2-201ENST00000577280 318 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AC008739.2-201ENST00000597006 317 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 AL391903.3-201ENST00000612158 163 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 MIR7703-201ENST00000620784 77 ntBASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
DEPDC4Q8N2C3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 RNU6-151P-201ENST00000364158 107 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 snoU2_19.4-201ENST00000364329 80 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 RNU1-63P-201ENST00000383902 164 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MIR513A2-201ENST00000385249 127 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MIR767-201ENST00000390228 109 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 SNORA12-201ENST00000391162 147 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MIR1185-2-201ENST00000408687 86 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 RN7SKP267-201ENST00000410381 285 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 RN7SKP167-201ENST00000411047 285 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 HLA-N-201ENST00000437516 135 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 RPS29P2-201ENST00000479278 136 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 PARP4P3-201ENST00000510265 317 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MIR548X2-201ENST00000579776 100 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MIR5096-201ENST00000583713 70 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 AC025754.2-201ENST00000606491 432 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MIR6853-201ENST00000619642 74 ntBASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DEPDC4Q8N2C3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
DEPDC4Q8N2C3 RNA5SP191-201ENST00000362585 102 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms