Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC093259.1-201ENST00000509755 300 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC109479.2-201ENST00000517842 174 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 MTND3P12-201ENST00000559068 328 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC022254.1-201ENST00000567857 235 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AL391840.1-201ENST00000571144 367 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC008147.4-201ENST00000617570 1204 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AC009509.4-201ENST00000619202 509 ntBASIC1.67□□□□□ -2.14
CCDC65Q8IXS2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 RNU6-552P-201ENST00000362869 119 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 RNU6-743P-201ENST00000364151 106 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 RNU6-266P-201ENST00000364225 107 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 RNU6-1103P-201ENST00000384150 107 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 MIR597-201ENST00000384968 97 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 SNORA12-201ENST00000391162 147 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 AC010975.2-201ENST00000427781 588 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 CETN4P-201ENST00000432407 469 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 SNAP23P1-201ENST00000433229 246 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 RNU7-180P-201ENST00000459240 63 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 AC098862.1-201ENST00000504991 413 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 MTND3P5-201ENST00000512798 333 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 AC008088.1-201ENST00000580993 280 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 VN1R107P-201ENST00000601784 209 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 AC068790.2-201ENST00000602601 557 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 Z99497.2-201ENST00000603634 310 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 Z69908.1-201ENST00000622603 247 ntBASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC65Q8IXS2 RNU6-1141P-201ENST00000364520 107 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 SNORA67.5-201ENST00000391036 107 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 RNA5SP465-201ENST00000391195 109 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 MTCYBP8-201ENST00000422855 651 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 MTCO2P19-201ENST00000427513 598 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AC022447.4-201ENST00000504053 364 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 SNORA31.16-201ENST00000516773 139 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AC115990.1-201ENST00000526957 301 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AL137161.1-201ENST00000532231 390 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AC119751.7-201ENST00000600494 245 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AL034555.1-201ENST00000604816 211 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AC005609.4-201ENST00000625071 447 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 AL450472.1-202ENST00000637286 180 ntBASIC1.65□□□□□ -2.15
CCDC65Q8IXS2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 RNU1-58P-201ENST00000362413 163 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 RNU11-3P-201ENST00000391111 133 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 RNA5SP501-201ENST00000410990 112 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AL353193.1-201ENST00000421444 268 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AL357134.1-201ENST00000445848 426 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC073415.1-201ENST00000449240 153 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 HMGN2P23-201ENST00000456759 269 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 RNU7-167P-201ENST00000459160 62 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC145146.1-201ENST00000496370 254 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC021146.2-201ENST00000504736 556 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 CCDC34P1-201ENST00000507441 517 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 MIR449C-201ENST00000516047 92 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 RNU6-991P-201ENST00000516168 107 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 HIF1AP1-201ENST00000553642 175 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC103996.1-201ENST00000555468 102 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AC091805.2-201ENST00000603848 235 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 SNORD98-201ENST00000636377 67 ntBASIC1.64□□□□□ -2.15
CCDC65Q8IXS2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 RNU6-827P-201ENST00000365553 106 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 RNU6-142P-201ENST00000384019 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms