Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 SNAP23P1-201ENST00000433229 246 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AL137159.1-201ENST00000452808 512 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 PMCHL2-203ENST00000457791 237 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AC087884.1-201ENST00000469738 328 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 HMGB1P35-201ENST00000503360 598 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AK3P2-201ENST00000507976 429 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 MTND3P5-201ENST00000512798 333 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AC107304.1-201ENST00000604229 296 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 RNU6-85P-201ENST00000605989 107 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 AL158209.2-201ENST00000619266 216 ntBASIC2.11□□□□□ -2.07
CCDC83Q8IWF9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 RNA5SP219-201ENST00000390940 113 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 MIR1289-2-201ENST00000408360 111 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AL590556.1-201ENST00000423231 483 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AL121601.2-201ENST00000438019 707 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 RPL7P54-201ENST00000438336 674 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 RNU7-138P-201ENST00000459479 64 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 SRRM1P2-201ENST00000464531 1192 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 MTCO3P38-201ENST00000468910 766 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AC108210.2-201ENST00000503681 201 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 SNORA14.1-201ENST00000516113 141 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 MIR3136-201ENST00000583498 78 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 VN1R80P-201ENST00000597126 338 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AL034555.1-201ENST00000604816 211 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AC068792.1-201ENST00000621354 417 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AL359880.1-201ENST00000621879 266 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 AC124864.2-201ENST00000624736 186 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 OR5AK4P-201ENST00000635912 903 ntBASIC2.1□□□□□ -2.07
CCDC83Q8IWF9 RNU6-1085P-201ENST00000363576 107 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 SNORD32A-201ENST00000364805 84 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 Y_RNA.409-201ENST00000383990 98 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 SNORD37.1-201ENST00000390968 65 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 MTCO3P40-201ENST00000392516 676 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 RN7SKP61-201ENST00000410642 295 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 AC078809.1-201ENST00000427601 140 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 TIMM9P3-201ENST00000428659 274 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 IFNA20P-201ENST00000436840 528 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 AC107401.1-201ENST00000503426 685 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 RNA5SP401-201ENST00000515920 127 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 RNU6-237P-201ENST00000515985 71 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 RNU6-189P-201ENST00000516120 101 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 CENPUP1-201ENST00000526649 1202 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 AC103705.1-201ENST00000619013 241 ntBASIC2.09□□□□□ -2.07
CCDC83Q8IWF9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.09□□□□□ -2.08
CCDC83Q8IWF9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 SNORA69-201ENST00000383895 132 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 RNU6-142P-201ENST00000384019 107 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 RNU6-38P-201ENST00000384085 107 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 Y_RNA.559-201ENST00000384686 107 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 RPL23AP95-201ENST00000426806 265 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AC244670.1-201ENST00000436879 112 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 PPP1R2P5-201ENST00000457256 603 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 TPTE2P5-203ENST00000458118 728 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 RNU6-333P-201ENST00000459117 107 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AC091885.1-201ENST00000506658 268 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 SNORD98-201ENST00000636377 67 ntBASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC83Q8IWF9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 Y_RNA.194-201ENST00000363985 102 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 MIR518A2-201ENST00000384966 87 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 MIR29C-201ENST00000385231 88 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 MIR1294-201ENST00000408503 142 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 AL030996.1-201ENST00000411430 235 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 POLHP1-201ENST00000411806 470 ntBASIC2.07□□□□□ -2.08
CCDC83Q8IWF9 SRIP3-201ENST00000413200 219 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms