Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 MIR3923-201ENST00000579521 83 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AC010525.2-201ENST00000590920 195 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AP000654.2-201ENST00000605633 586 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AL359757.2-201ENST00000624309 274 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRPF39Q86UA1 AC009541.1-201ENST00000438279 2662 ntBASIC2.32□□□□□ -2.04
PRPF39Q86UA1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 SNORA12-201ENST00000391162 147 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 RNU4-26P-201ENST00000410270 107 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AP000275.1-201ENST00000411943 390 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AL589823.1-201ENST00000429577 183 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AL359672.1-201ENST00000442302 409 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 snoU13.15-201ENST00000459407 104 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC055731.1-201ENST00000474387 401 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC083904.1-201ENST00000487828 231 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 RNU6-612P-201ENST00000516909 102 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 IGKV3-31-201ENST00000523109 329 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AK6P1-201ENST00000540219 478 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 SNRPGP18-201ENST00000553000 214 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC026464.5-201ENST00000562497 722 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 RNU6-89P-201ENST00000606519 100 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AL132822.1-201ENST00000617063 513 ntBASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRPF39Q86UA1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 SNORA46.1-201ENST00000391069 153 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AL355497.1-201ENST00000406262 551 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AL133396.1-201ENST00000432048 687 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC096638.1-201ENST00000444678 216 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 RPL9P9-202ENST00000466501 579 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC104564.1-201ENST00000493028 407 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC091874.1-201ENST00000511402 339 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 RNU6-567P-201ENST00000516746 107 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AL157687.1-201ENST00000554853 619 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC021231.3-201ENST00000558497 370 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC064836.2-201ENST00000609491 462 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC068944.2-201ENST00000610373 403 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 MTND4P23-201ENST00000447723 1363 ntBASIC2.3□□□□□ -2.04
PRPF39Q86UA1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.3□□□□□ -2.04
PRPF39Q86UA1 RNU6-1329P-201ENST00000365664 107 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 MIR181A1-201ENST00000385026 110 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 MIR29C-201ENST00000385231 88 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PRPF39Q86UA1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.29□□□□□ -2.04
PRPF39Q86UA1 MTCO1P20-201ENST00000425366 358 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 RPL23AP95-201ENST00000426806 265 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.29□□□□□ -2.04
PRPF39Q86UA1 PTP4A1P4-201ENST00000512479 322 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 MIR449C-201ENST00000516047 92 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
PRPF39Q86UA1 AC109446.1-201ENST00000566172 220 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.29□□□□□ -2.04
PRPF39Q86UA1 MIR4287-201ENST00000579398 78 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 AC078795.3-201ENST00000602913 472 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 MIR1321-201ENST00000637766 79 ntBASIC2.29□□□□□ -2.04
PRPF39Q86UA1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.28□□□□□ -2.04
PRPF39Q86UA1 MTND5P6-201ENST00000422338 1798 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.28□□□□□ -2.04
PRPF39Q86UA1 RNU6-227P-201ENST00000362865 103 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 SNORA16B-201ENST00000364674 135 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 SNORD14D-201ENST00000384390 87 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 RNU6-933P-201ENST00000384424 107 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 MIR518A2-201ENST00000384966 87 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 MIR504-201ENST00000385065 83 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 MIR450B-201ENST00000401182 78 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 SRIP3-201ENST00000413200 219 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.28□□□□□ -2.04
PRPF39Q86UA1 MTND3P9-201ENST00000429526 346 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.28□□□□□ -2.04
PRPF39Q86UA1 AC114801.2-201ENST00000503825 781 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 RNU6-991P-201ENST00000516168 107 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 AC109635.3-201ENST00000529536 185 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 MIR1248-201ENST00000629190 106 ntBASIC2.28□□□□□ -2.04
PRPF39Q86UA1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms