Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 Y_RNA.582-201ENST00000391023 95 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 EIF4EP2-201ENST00000422816 654 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 MTCYBP8-201ENST00000422855 651 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.77□□□□□ -2.13
ATL3Q6DD88 HMGB1P29-201ENST00000505659 499 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.77□□□□□ -2.13
ATL3Q6DD88 AC009646.1-201ENST00000510455 318 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.77□□□□□ -2.13
ATL3Q6DD88 AC109479.2-201ENST00000517842 174 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 MIR5583-1-201ENST00000580941 59 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 MIR4424-201ENST00000585257 86 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 VN1R107P-201ENST00000601784 209 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 AC017083.3-201ENST00000609955 700 ntBASIC1.77□□□□□ -2.13
ATL3Q6DD88 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
ATL3Q6DD88 SNORA8-201ENST00000384574 139 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 RNU6-293P-201ENST00000411259 106 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 VN1R36P-201ENST00000414936 291 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 AL117339.3-201ENST00000418733 162 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 CBX3P6-201ENST00000430257 527 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 RPS15AP10-201ENST00000432472 382 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 SNRPFP3-201ENST00000457792 225 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 RPL31P3-201ENST00000458430 332 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AL163973.1-201ENST00000484753 577 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 RN7SKP298-201ENST00000515950 94 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC022880.1-201ENST00000534017 973 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 HIF1AP1-201ENST00000553642 175 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 BNIP3P16-201ENST00000589779 534 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.76□□□□□ -2.13
ATL3Q6DD88 AL078605.1-201ENST00000603529 500 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC018889.1-201ENST00000605372 397 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC008536.2-201ENST00000607284 349 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC245008.1-201ENST00000608123 476 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 AC104073.3-201ENST00000610942 955 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.76□□□□□ -2.13
ATL3Q6DD88 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ATL3Q6DD88 RNU4-42P-201ENST00000364738 142 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 RNU6-996P-201ENST00000365438 107 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 SNORD14D-201ENST00000384390 87 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 RNU6-692P-201ENST00000384496 107 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 MIR517C-201ENST00000385103 95 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 MIR1262-201ENST00000408276 93 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC073464.1-201ENST00000429823 534 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 RNU7-167P-201ENST00000459160 62 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC087884.1-201ENST00000469738 328 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC087683.1-201ENST00000591187 441 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC073648.5-201ENST00000603502 305 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC091805.2-201ENST00000603848 235 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 BX248123.2-201ENST00000606318 124 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC007684.1-201ENST00000609671 477 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 MIR8081-201ENST00000611533 95 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 RMST_6.1-201ENST00000611980 203 ntBASIC1.75□□□□□ -2.13
ATL3Q6DD88 AC233981.2-201ENST00000611524 1614 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 RNU4-15P-201ENST00000362613 141 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 RNU6-266P-201ENST00000364225 107 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 SNORD32A-201ENST00000364805 84 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 RNU6-43P-201ENST00000384302 107 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 RNU6-1119P-201ENST00000384349 108 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC002486.1-201ENST00000435098 391 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.74□□□□□ -2.13
ATL3Q6DD88 PRELID3BP1-201ENST00000457142 540 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 CCDC34P1-201ENST00000507441 517 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC079140.5-201ENST00000507882 310 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 PTP4A1P4-201ENST00000512479 322 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC010493.1-201ENST00000513479 292 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 RNU6-295P-201ENST00000516901 104 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC090115.3-201ENST00000553218 849 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 MIR3941-201ENST00000582572 103 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 BNIP3P25-201ENST00000596023 559 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.74□□□□□ -2.13
ATL3Q6DD88 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC063943.3-201ENST00000615562 356 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AL354950.2-201ENST00000617939 290 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 MIR1248-201ENST00000629190 106 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 AC241585.2-209ENST00000638217 143 ntBASIC1.74□□□□□ -2.13
ATL3Q6DD88 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
ATL3Q6DD88 Y_RNA.1-201ENST00000352915 104 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 Y_RNA.255-201ENST00000364581 97 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ATL3Q6DD88 RNU6-482P-201ENST00000391068 107 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 MIR1283-2-201ENST00000408621 87 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 Y_RNA.597-201ENST00000410463 100 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ATL3Q6DD88 AL590556.1-201ENST00000423231 483 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 UBE2V1P4-201ENST00000425374 344 ntBASIC1.73□□□□□ -2.13
ATL3Q6DD88 SNAP23P1-201ENST00000433229 246 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms