Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 CYCSP23-201ENST00000519781 313 ntBASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC099654.7-201ENST00000635788 2127 ntBASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DQA1Q5Y7H0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC106871.1-201ENST00000568324 3102 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 Y_RNA.217-201ENST00000364214 105 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-19P-201ENST00000384718 107 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 CBX3P9-201ENST00000402326 552 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU2-49P-201ENST00000410666 184 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-1199P-201ENST00000411249 104 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 PTGES3P4-201ENST00000426243 356 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL606753.1-201ENST00000427435 87 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL714022.1-201ENST00000439897 151 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC010099.1-201ENST00000455434 375 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 Y_RNA.641-201ENST00000459414 105 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC107626.1-201ENST00000471084 183 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC103975.1-201ENST00000482506 483 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RPL30P14-201ENST00000482744 348 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-346P-201ENST00000516288 111 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AP002001.1-203ENST00000534002 267 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC105137.2-201ENST00000569073 466 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 MIR4308-201ENST00000580634 81 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 MIR3136-201ENST00000583498 78 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL162713.1-201ENST00000604480 262 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC068831.7-201ENST00000616954 363 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 MIR6076-201ENST00000617521 113 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 snoU18.1-201ENST00000629629 71 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 U6.106-201ENST00000636360 105 ntBASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DQA1Q5Y7H0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU2-37P-201ENST00000410695 177 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 CYCSP19-201ENST00000411715 316 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 SNORA71B-202ENST00000439232 272 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 SNRPGP5-201ENST00000456003 220 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC091021.1-201ENST00000468051 388 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL121594.1-201ENST00000475906 575 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 RAC1P2-201ENST00000511164 579 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNA5SP208-201ENST00000516156 78 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-191P-201ENST00000516295 94 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-155P-201ENST00000516347 100 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 MRPS18CP4-201ENST00000535821 231 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 MIR3923-201ENST00000579521 83 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL137843.1-201ENST00000605078 385 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 SNORA62.6-201ENST00000606322 83 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC104465.1-201ENST00000611365 139 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DQA1Q5Y7H0 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 Y_RNA.8-201ENST00000362353 102 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 Y_RNA.240-201ENST00000364469 95 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-245P-201ENST00000384020 107 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-804P-201ENST00000384286 107 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 IFNA11P-201ENST00000446352 526 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 RNU6-1219P-201ENST00000516143 112 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 SCARNA14-201ENST00000516903 136 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AP000867.2-201ENST00000532468 320 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms