Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.813-201ENST00000364639 102 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 RNU6-1032P-201ENST00000384100 107 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.577-201ENST00000384794 101 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 MIR559-201ENST00000385188 96 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 MIR153-2-201ENST00000385225 87 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 RNU2-63P-201ENST00000410792 194 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 AC007098.1-201ENST00000420122 367 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 RN7SL293P-201ENST00000481765 281 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.706-201ENST00000516933 99 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
RNF220Q5VTB9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF220Q5VTB9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 U3.9-201ENST00000363823 204 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 RNU6-99P-201ENST00000364721 107 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 SNORD42.2-201ENST00000365570 69 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 RNU6-378P-201ENST00000384324 107 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 MIR449B-201ENST00000384995 97 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 RNU6-1093P-201ENST00000391194 107 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 RNU2-25P-201ENST00000411041 191 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 AC003685.2-201ENST00000422795 395 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 RNU6-976P-201ENST00000516086 111 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.701-201ENST00000516812 110 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 RNU6-1198P-201ENST00000516904 67 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 AC004584.2-201ENST00000570407 410 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 AL138963.2-201ENST00000605137 226 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
RNF220Q5VTB9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RNF220Q5VTB9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 RNU6-17P-201ENST00000384245 107 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.463-201ENST00000384271 102 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 RNU6-18P-201ENST00000384527 107 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 MIR95-201ENST00000385072 81 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 SNORA46.1-201ENST00000391069 153 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 SNORA11-201ENST00000408789 128 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AL451074.5-201ENST00000415894 435 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 MTCO3P29-201ENST00000432119 779 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AC099799.1-201ENST00000439809 192 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 Y_RNA.639-201ENST00000458981 102 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 RN7SKP272-201ENST00000516988 232 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 RNU6-699P-201ENST00000517081 110 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 ELOCP31-201ENST00000540463 467 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 EIF4A1P12-201ENST00000551910 141 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AL355802.3-201ENST00000607571 545 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 AC022140.2-201ENST00000623500 188 ntBASIC2.91□□□□□ -1.94
RNF220Q5VTB9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.91□□□□□ -1.94
RNF220Q5VTB9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF220Q5VTB9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RNF220Q5VTB9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.94
RNF220Q5VTB9 MIR369-201ENST00000362155 70 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 RNU6-1115P-201ENST00000362490 106 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 RNU6-694P-201ENST00000364071 147 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.395-201ENST00000383945 109 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 U8.10-201ENST00000384260 133 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 MIR190B-201ENST00000401119 79 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AL138885.1-201ENST00000405921 675 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 RNU6-1156P-201ENST00000410365 100 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 MTCO2P12-201ENST00000427426 682 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AC092423.1-201ENST00000430165 186 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AC104389.3-201ENST00000445629 235 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.9□□□□□ -1.95
RNF220Q5VTB9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.9□□□□□ -1.95
RNF220Q5VTB9 RNU6-826P-201ENST00000516827 104 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 HSPE1P18-201ENST00000517602 280 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AC023824.2-201ENST00000566185 400 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 MIR3158-1-201ENST00000583596 81 ntBASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.9□□□□□ -1.95
RNF220Q5VTB9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms