Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC112492.4-201ENST00000456549 352 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 HMGN1P10-201ENST00000474557 553 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RPL36AP48-201ENST00000485521 314 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RAC1P5-201ENST00000512182 576 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 RN7SKP43-201ENST00000516173 320 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.720-201ENST00000517166 92 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 HSBP1P1-201ENST00000555205 166 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 MIR3136-201ENST00000583498 78 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC016727.2-201ENST00000603988 621 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC104695.3-201ENST00000604052 296 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 MIR8057-201ENST00000620957 69 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC002064.3-201ENST00000623448 346 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 AC093908.1-201ENST00000623125 8092 ntBASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
KHDC1Q4VXA5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RNU6-212P-201ENST00000362642 104 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RNY3P11-201ENST00000364153 102 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 MIR32-201ENST00000384965 70 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 MIR153-2-201ENST00000385225 87 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 SNORA11.1-201ENST00000408133 129 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.592-201ENST00000410274 109 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AL590135.1-201ENST00000422215 156 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC019205.3-201ENST00000424573 156 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC096644.2-201ENST00000429278 159 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC016700.2-201ENST00000446011 156 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 MTND5P22-201ENST00000458380 195 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RNU7-169P-201ENST00000459456 61 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC112771.1-201ENST00000463581 102 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RPL31P41-201ENST00000477967 372 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RPL22P13-201ENST00000493291 347 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC093852.1-201ENST00000503587 266 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 SNORA31.6-201ENST00000516241 130 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RNU6-764P-201ENST00000516396 105 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 RNU6-567P-201ENST00000516746 107 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC091144.1-201ENST00000519573 138 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 MIR5188-201ENST00000583467 113 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
KHDC1Q4VXA5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AL359854.1-201ENST00000614203 1594 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 RNU6-1159P-201ENST00000362933 107 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 U3.13-201ENST00000364804 214 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 RNU6-1083P-201ENST00000384022 107 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.424-201ENST00000384063 103 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 SNORA36A-201ENST00000384221 132 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.459-201ENST00000384251 102 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC012306.1-201ENST00000423267 114 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 RNA5SP76-201ENST00000516277 87 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 SNORA70.24-201ENST00000517233 118 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 SCARNA11.3-201ENST00000517276 130 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC006600.1-201ENST00000572529 153 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC011471.1-201ENST00000585766 187 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AL132822.1-201ENST00000617063 513 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 U2.1-201ENST00000618978 145 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AP003122.5-201ENST00000527668 3766 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KHDC1Q4VXA5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.106-201ENST00000363189 100 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 SNORD14.1-201ENST00000365609 90 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.455-201ENST00000384230 98 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 RNU1-57P-201ENST00000384491 166 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 Y_RNA.527-201ENST00000384573 102 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 MIR491-201ENST00000384877 84 ntBASIC3.09□□□□□ -1.91
KHDC1Q4VXA5 MTCO3P19-201ENST00000415864 321 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms