Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CKS1BP7-201ENST00000522230 235 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 GTF3AP2-201ENST00000557014 266 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC074050.1-201ENST00000563247 211 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 ELOCP29-201ENST00000588193 334 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC078795.3-201ENST00000602913 472 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC092608.2-201ENST00000624427 218 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 MTND5P30-201ENST00000452896 1731 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 AC004944.1-201ENST00000517807 3059 ntBASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SNAI3Q3KNW1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RNU6-1115P-201ENST00000362490 106 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RNU6-331P-201ENST00000384724 107 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 U3.37-201ENST00000408528 213 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RNU6-174P-201ENST00000410406 106 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 USMG5P1-201ENST00000425964 177 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 PTGES3P4-201ENST00000426243 356 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 DAP3P1-201ENST00000441522 278 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 MIR2053-201ENST00000459295 91 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RPL9P9-202ENST00000466501 579 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 SMURF2P1-201ENST00000514992 481 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RNU6-470P-201ENST00000515954 104 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RNU6-976P-201ENST00000516086 111 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 RNA5SP282-201ENST00000516355 108 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 EIF4BP1-201ENST00000554881 351 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 AC103996.1-201ENST00000555468 102 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 MIR4765-201ENST00000585007 77 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 SCARNA4-202ENST00000625402 129 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 U4.7-201ENST00000638126 106 ntBASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
SNAI3Q3KNW1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 ZNF271P-202ENST00000465539 1970 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.2-201ENST00000362330 96 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.28-201ENST00000362554 111 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 SNORA33.2-201ENST00000365413 134 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 SNORA22B-201ENST00000383876 138 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 Y_RNA.463-201ENST00000384271 102 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 SNORA41-201ENST00000384675 132 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 MIR483-201ENST00000385070 76 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC243428.1-201ENST00000421099 264 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC018865.2-201ENST00000423631 129 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 SUMO1P4-201ENST00000429430 302 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 ARL5AP4-201ENST00000430731 512 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 RPS15AP10-201ENST00000432472 382 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AP001324.2-201ENST00000461163 319 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 RNU6-377P-201ENST00000515965 102 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 SCARNA3-201ENST00000517097 143 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC009163.5-201ENST00000575421 637 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 LARP7P3-201ENST00000579888 337 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC005899.2-201ENST00000584353 90 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC009314.1-201ENST00000603871 304 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AC011890.2-201ENST00000613393 294 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 MIR6134-201ENST00000617606 109 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.22□□□□□ -2.05
SNAI3Q3KNW1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU6-78P-201ENST00000362897 107 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU6-428P-201ENST00000362942 107 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU6-942P-201ENST00000363002 107 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 SNORA80A-201ENST00000363922 136 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 SNORA38-201ENST00000363946 132 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 SNORA63C-201ENST00000364578 129 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 U8.8-201ENST00000365399 135 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU6-898P-201ENST00000365627 104 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 Y_RNA.422-201ENST00000384054 114 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU6-790P-201ENST00000384479 105 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RNU6-308P-201ENST00000390957 107 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 RPS29P13-201ENST00000402041 169 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 Z92545.1-201ENST00000411782 234 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AC073901.1-201ENST00000462471 408 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AC133134.1-201ENST00000466800 359 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms