Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AL139095.1-201ENST00000404326 391 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.31□□□□□ -1.88
SF3B3Q15393 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AC009963.1-201ENST00000417265 157 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 DPH3P2-201ENST00000422618 250 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 EIF4EP2-201ENST00000422816 654 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 TOMM20P4-201ENST00000427861 435 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SF3B3Q15393 U8.21-201ENST00000459536 136 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AC010655.3-201ENST00000478818 450 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 Y_RNA.687-201ENST00000516558 91 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 RNU6-635P-201ENST00000516651 102 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AC022616.4-201ENST00000522985 181 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AL161670.1-201ENST00000554348 137 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 MIR5696-201ENST00000578474 85 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 MIR5701-3-201ENST00000578890 82 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.31□□□□□ -1.88
SF3B3Q15393 MIR3605-201ENST00000583214 100 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 MIR5701-1-201ENST00000585138 82 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AC005046.1-201ENST00000608515 625 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 MIR5701-2-201ENST00000615634 82 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.31□□□□□ -1.88
SF3B3Q15393 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
SF3B3Q15393 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SF3B3Q15393 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SF3B3Q15393 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SF3B3Q15393 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B3Q15393 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SF3B3Q15393 RNU6-428P-201ENST00000362942 107 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 RNA5SP139-201ENST00000364340 117 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 Y_RNA.380-201ENST00000365663 111 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 RNU6-140P-201ENST00000384566 108 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 MIR181A2-201ENST00000384863 110 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 HMGN2P30-201ENST00000423237 256 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 NDUFB4P6-201ENST00000436819 366 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.3□□□□□ -1.88
SF3B3Q15393 RPL30P5-201ENST00000494923 336 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 RNU1-41P-201ENST00000516161 162 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 RNU1-48P-201ENST00000516400 162 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 SNORA40.14-201ENST00000516543 86 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 RNU6-703P-201ENST00000516946 107 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 AC109329.2-201ENST00000519658 482 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 AP005902.1-201ENST00000521358 186 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 HSBP1P1-201ENST00000555205 166 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 AL355297.3-201ENST00000604082 446 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 MIR8076-201ENST00000611401 83 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 AL021879.1-201ENST00000611756 288 ntBASIC3.3□□□□□ -1.88
SF3B3Q15393 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.3□□□□□ -1.88
SF3B3Q15393 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B3Q15393 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SF3B3Q15393 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B3Q15393 ZNF299P-201ENST00000406845 1804 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 RNU6-702P-201ENST00000364982 107 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 Y_RNA.424-201ENST00000384063 103 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 RNU6-72P-201ENST00000384285 79 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 MIR521-1-201ENST00000384902 87 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 RNU6-1109P-201ENST00000391187 107 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 Z96811.1-201ENST00000445880 108 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 RNU6-1282P-201ENST00000516735 96 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 CASP1P1-201ENST00000526345 212 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC110588.1-201ENST00000559699 137 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AC027176.1-201ENST00000560204 514 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 MIR5188-201ENST00000583467 113 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC016727.2-201ENST00000603988 621 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 Z98751.3-201ENST00000604447 521 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 HMGB1P24-202ENST00000615653 685 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AL138825.1-201ENST00000618587 192 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AL590808.1-201ENST00000618696 141 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 AC027309.3-201ENST00000623419 351 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 U2.21-201ENST00000637295 81 ntBASIC3.29□□□□□ -1.88
SF3B3Q15393 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.29□□□□□ -1.88
SF3B3Q15393 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B3Q15393 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SF3B3Q15393 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B3Q15393 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SF3B3Q15393 RNU6-595P-201ENST00000363944 107 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 Z98749.2-208ENST00000381646 500 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 RNU6-217P-201ENST00000384164 104 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 MT-TG-201ENST00000387429 68 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SF3B3Q15393 RPS29P13-201ENST00000402041 169 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 RNA5SP508-201ENST00000411327 119 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.28□□□□□ -1.88
SF3B3Q15393 AP004217.1-201ENST00000480579 346 ntBASIC3.28□□□□□ -1.88
SF3B3Q15393 RN7SL283P-201ENST00000489055 303 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms