Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
SSRP1Q08945 AL358075.3-201ENST00000426289 226 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 RPL23AP22-201ENST00000437556 453 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.64□□□□□ -1.83
SSRP1Q08945 AC006445.1-201ENST00000491925 405 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 AIG1P1-201ENST00000503376 148 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 SNORA74D-201ENST00000516404 141 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 SNORA31.16-201ENST00000516773 139 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.64□□□□□ -1.83
SSRP1Q08945 AC008269.2-201ENST00000561915 1105 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 AL021879.1-201ENST00000611756 288 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 UCA1.1-201ENST00000620952 75 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 SNORD98-201ENST00000636377 67 ntBASIC3.64□□□□□ -1.83
SSRP1Q08945 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SSRP1Q08945 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SSRP1Q08945 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSRP1Q08945 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSRP1Q08945 RNU6-1159P-201ENST00000362933 107 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RNU6-529P-201ENST00000363383 104 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 Y_RNA.149-201ENST00000363558 117 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RNU4-56P-201ENST00000364700 142 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 CD24P4-201ENST00000382840 243 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RNU6-463P-201ENST00000384340 107 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 Y_RNA.551-201ENST00000384661 102 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RPL21P75-201ENST00000396599 483 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RPL21P28-201ENST00000401418 483 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AL590556.1-201ENST00000423231 483 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC012306.1-201ENST00000423267 114 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 USP9YP16-201ENST00000430287 407 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 USP9YP23-201ENST00000455085 407 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC112771.1-201ENST00000463581 102 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RPL21P39-201ENST00000463605 483 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC087190.1-201ENST00000484462 480 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RPL36AP48-201ENST00000485521 314 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC107032.1-201ENST00000485945 480 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC132942.1-201ENST00000486753 483 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC093591.1-201ENST00000491435 481 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 RPL21P16-201ENST00000495531 483 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 MTCO2P24-201ENST00000515611 426 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.63□□□□□ -1.83
SSRP1Q08945 AC079598.5-201ENST00000547460 117 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.63□□□□□ -1.83
SSRP1Q08945 AL390123.1-201ENST00000603216 237 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC073410.2-201ENST00000603240 332 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.63□□□□□ -1.83
SSRP1Q08945 AL078605.1-201ENST00000603529 500 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.63□□□□□ -1.83
SSRP1Q08945 PRR13P7-201ENST00000605538 430 ntBASIC3.63□□□□□ -1.83
SSRP1Q08945 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.63□□□□□ -1.83
SSRP1Q08945 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
SSRP1Q08945 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.63□□□□□ -1.83
SSRP1Q08945 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SSRP1Q08945 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.63□□□□□ -1.83
SSRP1Q08945 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSRP1Q08945 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSRP1Q08945 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.62□□□□□ -1.83
SSRP1Q08945 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSRP1Q08945 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSRP1Q08945 RNU6-222P-201ENST00000362438 107 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 Y_RNA.27-201ENST00000362540 103 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 Y_RNA.319-201ENST00000365138 92 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 RNU6-1027P-201ENST00000383998 107 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 SNORA7.4-201ENST00000384249 137 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 U8.10-201ENST00000384260 133 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 SNORD15B-201ENST00000384714 146 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 UBA52P6-201ENST00000399822 382 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 RNA5SP293-201ENST00000410527 113 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 MTCYBP9-201ENST00000431021 303 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 RPS12P18-201ENST00000442381 270 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.62□□□□□ -1.83
SSRP1Q08945 snoU13.6-201ENST00000458785 104 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 RN7SL807P-201ENST00000470923 297 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 AC010655.3-201ENST00000478818 450 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 MRPS35P2-201ENST00000508242 191 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 RAC1P5-201ENST00000512182 576 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 RNU5F-2P-201ENST00000516066 82 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 AC131281.1-201ENST00000522984 164 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 AL442163.3-201ENST00000554110 156 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 UBL5P2-201ENST00000583788 219 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 7SK.10-201ENST00000621414 298 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 AC002064.3-201ENST00000623448 346 ntBASIC3.62□□□□□ -1.83
SSRP1Q08945 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SSRP1Q08945 Z75746.1-201ENST00000440243 2080 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AL359854.1-201ENST00000614203 1594 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 Y_RNA.40-201ENST00000362645 93 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 Y_RNA.176-201ENST00000363815 109 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 RNU6-196P-201ENST00000384315 107 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 RNU6-541P-201ENST00000384709 110 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 MIR186-201ENST00000384988 86 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 RNU1-139P-201ENST00000391307 165 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 RPS26P42-201ENST00000413485 326 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.61□□□□□ -1.83
SSRP1Q08945 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms