Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.04□□□□□ -2.08
SCN1BQ07699 BNIP3P25-201ENST00000596023 559 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AL162413.1-201ENST00000603198 110 ntBASIC2.04□□□□□ -2.08
SCN1BQ07699 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
SCN1BQ07699 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU6-227P-201ENST00000362865 103 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU6-23P-201ENST00000363283 107 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU6-1317P-201ENST00000364582 104 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SCN1BQ07699 MIR208B-201ENST00000401172 77 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 SRIP2-201ENST00000428470 166 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 ERLEC1P1-201ENST00000433806 578 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN1BQ07699 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN1BQ07699 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN1BQ07699 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 U8.21-201ENST00000459536 136 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RPL9P9-202ENST00000466501 579 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN1BQ07699 RNA5SP148-201ENST00000516527 94 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU6-1332P-201ENST00000516666 104 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU1-40P-201ENST00000516816 164 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU1-97P-201ENST00000516872 164 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.03□□□□□ -2.08
SCN1BQ07699 AC021269.2-201ENST00000532318 330 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AL157687.1-201ENST00000554853 619 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN1BQ07699 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.03□□□□□ -2.08
SCN1BQ07699 AC010525.2-201ENST00000590920 195 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 RNU6-89P-201ENST00000606519 100 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AC004492.1-201ENST00000607036 742 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 FAM157A-202ENST00000615155 405 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 MIR6817-201ENST00000615588 66 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 AC130454.1-201ENST00000622948 401 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 FER-210ENST00000628534 558 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN1BQ07699 AC099654.12-201ENST00000639868 649 ntBASIC2.03□□□□□ -2.08
SCN1BQ07699 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCN1BQ07699 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.03□□□□□ -2.08
SCN1BQ07699 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SCN1BQ07699 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN1BQ07699 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SCN1BQ07699 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SCN1BQ07699 AC062016.1-201ENST00000355719 319 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 RNA5SP68-201ENST00000363885 119 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 RNU6-160P-201ENST00000384591 107 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 RNU2-41P-201ENST00000410991 178 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.02□□□□□ -2.09
SCN1BQ07699 FTH1P25-201ENST00000447665 469 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC108938.1-201ENST00000451204 136 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 RPS29P27-201ENST00000463711 170 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 ATP5EP1-201ENST00000510257 156 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC026436.1-201ENST00000510537 270 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC005741.1-201ENST00000511094 432 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC092436.3-201ENST00000511788 257 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
SCN1BQ07699 RNU6-506P-201ENST00000516553 94 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 RNU6-314P-201ENST00000516574 104 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.02□□□□□ -2.09
SCN1BQ07699 EIF4A1P12-201ENST00000551910 141 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 CYP2C61P-201ENST00000604072 290 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC005034.5-201ENST00000604219 466 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AC097065.2-201ENST00000608159 533 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 AL590240.4-201ENST00000616908 390 ntBASIC2.02□□□□□ -2.09
SCN1BQ07699 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SCN1BQ07699 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.01□□□□□ -2.09
SCN1BQ07699 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 RNU6-214P-201ENST00000384130 107 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SCN1BQ07699 RNU6-908P-201ENST00000410160 94 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 MTCO3P41-201ENST00000414801 328 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AC244636.1-201ENST00000421152 228 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AC012306.1-201ENST00000423267 114 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 HMGN2P38-201ENST00000423806 265 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 HMGN2P19-201ENST00000425149 265 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 RPL23AP6-201ENST00000446637 472 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AMD1P1-201ENST00000457220 922 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 snoU13.6-201ENST00000458785 104 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN1BQ07699 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
SCN1BQ07699 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.01□□□□□ -2.09
SCN1BQ07699 AL109918.3-201ENST00000603072 338 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AF250324.2-201ENST00000608299 610 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 DISC2.1-201ENST00000612827 205 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AL773524.1-201ENST00000614065 229 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 AC015540.1-201ENST00000615828 501 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.01□□□□□ -2.09
SCN1BQ07699 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SCN1BQ07699 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2□□□□□ -2.09
SCN1BQ07699 AC121333.1-201ENST00000567488 2709 ntBASIC2□□□□□ -2.09
SCN1BQ07699 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SCN1BQ07699 SNORA8-201ENST00000384574 139 ntBASIC2□□□□□ -2.09
SCN1BQ07699 AL359511.1-201ENST00000402970 211 ntBASIC2□□□□□ -2.09
SCN1BQ07699 AL590002.1-201ENST00000406554 418 ntBASIC2□□□□□ -2.09
SCN1BQ07699 RNA5SP501-201ENST00000410990 112 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms