Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 AL627230.6-201ENST00000611129 280 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 AL359880.1-201ENST00000621879 266 ntBASIC2.41□□□□□ -2.02
CALD1Q05682 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CALD1Q05682 SNORD115-3-201ENST00000363100 82 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 RNU6-1085P-201ENST00000363576 107 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 RNU4-24P-201ENST00000364565 139 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 Y_RNA.378-201ENST00000365652 113 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CALD1Q05682 RPS29P13-201ENST00000402041 169 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 RNU6-261P-201ENST00000459506 102 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 AC107032.1-201ENST00000485945 480 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.4□□□□□ -2.03
CALD1Q05682 SNORA14.1-201ENST00000516113 141 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 RNU6-189P-201ENST00000516120 101 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 RNA5SP137-201ENST00000516833 135 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 CENPUP1-201ENST00000526649 1202 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 NDUFA5P6-201ENST00000542110 379 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.4□□□□□ -2.03
CALD1Q05682 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.4□□□□□ -2.03
CALD1Q05682 MIR3941-201ENST00000582572 103 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.4□□□□□ -2.03
CALD1Q05682 AC092747.3-201ENST00000603769 301 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 AL034555.1-201ENST00000604816 211 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 SNORD98-201ENST00000636377 67 ntBASIC2.4□□□□□ -2.03
CALD1Q05682 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CALD1Q05682 RNU6-743P-201ENST00000364151 106 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CALD1Q05682 RNU6-38P-201ENST00000384085 107 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 HMGN2P39-201ENST00000398005 273 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.39□□□□□ -2.03
CALD1Q05682 USP9YP18-201ENST00000425912 695 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 SNAP23P1-201ENST00000433229 246 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 RNU6-333P-201ENST00000459117 107 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 AC055731.1-201ENST00000474387 401 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 HMGB1P35-201ENST00000503360 598 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 AC009646.1-201ENST00000510455 318 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 MRPS17P9-201ENST00000511924 393 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 RPL39P5-202ENST00000512505 151 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 RNU6-295P-201ENST00000516901 104 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 RNU6-835P-201ENST00000516974 104 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 AC022616.8-201ENST00000533569 253 ntBASIC2.39□□□□□ -2.03
CALD1Q05682 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.39□□□□□ -2.03
CALD1Q05682 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CALD1Q05682 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CALD1Q05682 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CALD1Q05682 AL356292.1-201ENST00000283110 373 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 SNORA16.1-201ENST00000364597 132 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 RNU6-234P-201ENST00000365229 104 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 Y_RNA.436-201ENST00000384097 102 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 SNORA12-201ENST00000391162 147 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 SNORA26.9-201ENST00000391322 122 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 POLHP1-201ENST00000411806 470 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.38□□□□□ -2.03
CALD1Q05682 RPL31P63-201ENST00000422565 375 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.38□□□□□ -2.03
CALD1Q05682 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.38□□□□□ -2.03
CALD1Q05682 AL137159.1-201ENST00000452808 512 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 RNU7-138P-201ENST00000459479 64 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 AC091874.1-201ENST00000511402 339 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 SNORA31.16-201ENST00000516773 139 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 AC115990.1-201ENST00000526957 301 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CALD1Q05682 AL132822.1-201ENST00000617063 513 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 AC073534.2-201ENST00000620377 381 ntBASIC2.38□□□□□ -2.03
CALD1Q05682 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CALD1Q05682 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CALD1Q05682 RNU6-1141P-201ENST00000364520 107 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 SNORD32A-201ENST00000364805 84 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 MIR676-201ENST00000390702 67 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 MIR1289-2-201ENST00000408360 111 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AL590135.1-201ENST00000422215 156 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.37□□□□□ -2.03
CALD1Q05682 AL590556.1-201ENST00000423231 483 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC019205.3-201ENST00000424573 156 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 IFNA20P-201ENST00000436840 528 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC016700.2-201ENST00000446011 156 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 PRELID3BP1-201ENST00000457142 540 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC015911.1-201ENST00000495111 156 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 Y_RNA.704-201ENST00000516851 102 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 RNU2-19P-201ENST00000517288 84 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.37□□□□□ -2.03
CALD1Q05682 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.37□□□□□ -2.03
CALD1Q05682 AL512360.1-201ENST00000555346 234 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.37□□□□□ -2.03
CALD1Q05682 MIR3122-201ENST00000577243 73 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC026271.5-201ENST00000577873 130 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AC103987.3-201ENST00000582071 292 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 AL121757.2-201ENST00000611223 313 ntBASIC2.37□□□□□ -2.03
CALD1Q05682 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CALD1Q05682 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.37□□□□□ -2.03
CALD1Q05682 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.36□□□□□ -2.03
CALD1Q05682 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CALD1Q05682 RNU4-15P-201ENST00000362613 141 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 Y_RNA.41-201ENST00000362646 102 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 Y_RNA.372-201ENST00000365599 102 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 Y_RNA.481-201ENST00000384373 102 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 Y_RNA.517-201ENST00000384551 106 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 SNORA40.18-201ENST00000391200 128 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 MIR1262-201ENST00000408276 93 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 MIR1294-201ENST00000408503 142 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms