Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 RNU5F-2P-201ENST00000516066 82 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 RNU6-965P-201ENST00000516721 96 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 CYCSP27-201ENST00000527643 293 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 NDUFA5P6-201ENST00000542110 379 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC004223.2-201ENST00000590309 544 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC107304.1-201ENST00000604229 296 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AL670379.2-201ENST00000604983 252 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC017083.3-201ENST00000609955 700 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC004908.3-201ENST00000610248 625 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 HULC.1-201ENST00000612720 240 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 uc_338.34-201ENST00000617467 174 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC068792.1-201ENST00000621354 417 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 AC139792.3-201ENST00000623525 224 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.58□□□□□ -2.16
HMGCS1Q01581 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
HMGCS1Q01581 RNU6-1285P-201ENST00000363480 105 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 RNU6-1222P-201ENST00000384615 107 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 MIR764-201ENST00000390811 85 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AL606923.1-201ENST00000406616 190 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AL117339.3-201ENST00000418733 162 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AL358453.1-201ENST00000422522 250 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 RPS15AP10-201ENST00000432472 382 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 MTCO2P18-201ENST00000457151 658 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 snoU13.23-201ENST00000458863 104 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 RNU6-1038P-201ENST00000516516 104 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 RNU6-548P-201ENST00000517083 115 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 AP000763.2-201ENST00000540641 163 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 DEFB122-202ENST00000569013 197 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 MIR4424-201ENST00000585257 86 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 NBR2-204ENST00000587322 63 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AL078605.1-201ENST00000603529 500 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 RNU6-85P-201ENST00000605989 107 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AC245008.1-201ENST00000608123 476 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 U2.17-201ENST00000611454 95 ntBASIC1.57□□□□□ -2.16
HMGCS1Q01581 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.57□□□□□ -2.16
HMGCS1Q01581 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 RNU6-546P-201ENST00000383991 107 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 RNU6-259P-201ENST00000383999 107 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 SNORA8-201ENST00000384574 139 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AL627390.1-201ENST00000396055 340 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 Y_RNA.597-201ENST00000410463 100 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 AC010975.2-201ENST00000427781 588 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AL121601.2-201ENST00000438019 707 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 Z83846.1-201ENST00000446798 265 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 MTND2P33-201ENST00000506452 1031 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AC009646.1-201ENST00000510455 318 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 SNORA40.12-201ENST00000516329 111 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AC109479.2-201ENST00000517842 174 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 MTND4P7-201ENST00000523876 130 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 CBX3P4-201ENST00000538909 354 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AC090115.3-201ENST00000553218 849 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 MIR3683-201ENST00000580847 82 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
HMGCS1Q01581 AL132822.1-201ENST00000617063 513 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 AL158209.2-201ENST00000619266 216 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 MIR6863-201ENST00000636112 90 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HMGCS1Q01581 MTND4P23-201ENST00000447723 1363 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 WWP1P1-201ENST00000466609 2769 ntBASIC1.56□□□□□ -2.16
HMGCS1Q01581 RNU6-43P-201ENST00000384302 107 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 RNA5SP219-201ENST00000390940 113 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 RPS29P13-201ENST00000402041 169 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 RNU6-1245P-201ENST00000411130 106 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 USP9YP18-201ENST00000425912 695 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGCS1Q01581 AL137159.1-201ENST00000452808 512 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 MTCO3P38-201ENST00000468910 766 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 AK3P2-201ENST00000507976 429 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 RN7SKP256-201ENST00000517201 314 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 COPS8P3-201ENST00000526024 482 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 AC104383.1-201ENST00000530297 370 ntBASIC1.55□□□□□ -2.16
HMGCS1Q01581 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGCS1Q01581 AL118558.2-201ENST00000556294 238 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms