Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MTND4P14-201ENST00000435799 1354 ntBASIC1.62□□□□□ -2.15
CBX1P83916 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CBX1P83916 RNU6-1120P-201ENST00000362988 108 ntBASIC1.62□□□□□ -2.15
CBX1P83916 Y_RNA.399-201ENST00000383955 105 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AL049545.1-201ENST00000401856 572 ntBASIC1.62□□□□□ -2.15
CBX1P83916 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.62□□□□□ -2.15
CBX1P83916 AL356010.1-201ENST00000456364 102 ntBASIC1.62□□□□□ -2.15
CBX1P83916 RPS29P23-201ENST00000458635 123 ntBASIC1.62□□□□□ -2.15
CBX1P83916 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.62□□□□□ -2.15
CBX1P83916 RN7SKP219-201ENST00000516825 296 ntBASIC1.62□□□□□ -2.15
CBX1P83916 RNU6-430P-201ENST00000517078 107 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AL137161.1-201ENST00000532231 390 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.62□□□□□ -2.15
CBX1P83916 AL391840.1-201ENST00000571144 367 ntBASIC1.62□□□□□ -2.15
CBX1P83916 MIR3198-2-201ENST00000577868 80 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AC005786.1-201ENST00000588553 154 ntBASIC1.62□□□□□ -2.15
CBX1P83916 NIFKP6-201ENST00000598115 845 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AC012507.3-201ENST00000603556 477 ntBASIC1.62□□□□□ -2.15
CBX1P83916 AP001596.2-201ENST00000608410 312 ntBASIC1.62□□□□□ -2.15
CBX1P83916 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.62□□□□□ -2.15
CBX1P83916 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CBX1P83916 ZNF355P-201ENST00000427301 3216 ntBASIC1.61□□□□□ -2.15
CBX1P83916 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CBX1P83916 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CBX1P83916 RNU6-552P-201ENST00000362869 119 ntBASIC1.61□□□□□ -2.15
CBX1P83916 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
CBX1P83916 SNORA26.3-201ENST00000391119 136 ntBASIC1.61□□□□□ -2.15
CBX1P83916 RNU6-903P-201ENST00000391270 109 ntBASIC1.61□□□□□ -2.15
CBX1P83916 RNA5SP201-201ENST00000410316 124 ntBASIC1.61□□□□□ -2.15
CBX1P83916 RN7SKP142-201ENST00000411236 328 ntBASIC1.61□□□□□ -2.15
CBX1P83916 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.61□□□□□ -2.15
CBX1P83916 MTCO3P41-201ENST00000414801 328 ntBASIC1.61□□□□□ -2.15
CBX1P83916 MTATP6P18-201ENST00000417994 673 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.61□□□□□ -2.15
CBX1P83916 AC123900.1-201ENST00000420390 96 ntBASIC1.61□□□□□ -2.15
CBX1P83916 NCOR1P3-201ENST00000420479 303 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AC092447.3-201ENST00000426027 686 ntBASIC1.61□□□□□ -2.15
CBX1P83916 RPL23AP95-201ENST00000426806 265 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AL133396.1-201ENST00000432048 687 ntBASIC1.61□□□□□ -2.15
CBX1P83916 MTND4P32-201ENST00000437189 1237 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AL031667.1-201ENST00000440222 725 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.61□□□□□ -2.15
CBX1P83916 RNU1-131P-201ENST00000458943 161 ntBASIC1.61□□□□□ -2.15
CBX1P83916 RNU7-167P-201ENST00000459160 62 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AC016632.1-201ENST00000503994 196 ntBASIC1.61□□□□□ -2.15
CBX1P83916 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.61□□□□□ -2.15
CBX1P83916 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.61□□□□□ -2.15
CBX1P83916 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.61□□□□□ -2.15
CBX1P83916 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.61□□□□□ -2.15
CBX1P83916 AC013412.1-201ENST00000610687 192 ntBASIC1.61□□□□□ -2.15
CBX1P83916 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.61□□□□□ -2.15
CBX1P83916 U2.17-201ENST00000611454 95 ntBASIC1.61□□□□□ -2.15
CBX1P83916 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.61□□□□□ -2.15
CBX1P83916 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CBX1P83916 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
CBX1P83916 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.6□□□□□ -2.15
CBX1P83916 RNU6-517P-201ENST00000384362 110 ntBASIC1.6□□□□□ -2.15
CBX1P83916 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
CBX1P83916 MIR934-201ENST00000401241 83 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.6□□□□□ -2.15
CBX1P83916 AL513124.1-201ENST00000450410 614 ntBASIC1.6□□□□□ -2.15
CBX1P83916 HMGN2P23-201ENST00000456759 269 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CBX1P83916 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AC130509.1-201ENST00000464158 433 ntBASIC1.6□□□□□ -2.15
CBX1P83916 MTCO2P4-201ENST00000517968 247 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.6□□□□□ -2.15
CBX1P83916 AL512310.1-201ENST00000548639 172 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.6□□□□□ -2.15
CBX1P83916 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.6□□□□□ -2.15
CBX1P83916 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.6□□□□□ -2.15
CBX1P83916 AC078795.3-201ENST00000602913 472 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AC063944.3-201ENST00000609969 533 ntBASIC1.6□□□□□ -2.15
CBX1P83916 AC120349.3-201ENST00000624377 529 ntBASIC1.6□□□□□ -2.15
CBX1P83916 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
CBX1P83916 AC245060.5-201ENST00000610778 3293 ntBASIC1.6□□□□□ -2.15
CBX1P83916 U3.9-201ENST00000363823 204 ntBASIC1.59□□□□□ -2.15
CBX1P83916 RNA5SP126-201ENST00000365092 109 ntBASIC1.59□□□□□ -2.15
CBX1P83916 RNU6-438P-201ENST00000365561 103 ntBASIC1.59□□□□□ -2.15
CBX1P83916 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.59□□□□□ -2.15
CBX1P83916 RPS27AP8-201ENST00000452665 445 ntBASIC1.59□□□□□ -2.15
CBX1P83916 RPS29P21-201ENST00000496272 170 ntBASIC1.59□□□□□ -2.15
CBX1P83916 YWHAEP4-201ENST00000505390 198 ntBASIC1.59□□□□□ -2.15
CBX1P83916 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.59□□□□□ -2.15
CBX1P83916 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.59□□□□□ -2.15
CBX1P83916 ATP5EP1-201ENST00000510257 156 ntBASIC1.59□□□□□ -2.15
CBX1P83916 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.59□□□□□ -2.15
CBX1P83916 HIF1AP1-201ENST00000553642 175 ntBASIC1.59□□□□□ -2.15
CBX1P83916 MTATP6P3-201ENST00000581686 676 ntBASIC1.59□□□□□ -2.15
CBX1P83916 PCGEM1.1-201ENST00000613431 131 ntBASIC1.59□□□□□ -2.15
CBX1P83916 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CBX1P83916 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
CBX1P83916 Y_RNA.504-201ENST00000384481 104 ntBASIC1.58□□□□□ -2.16
CBX1P83916 MIR9-3-201ENST00000385084 90 ntBASIC1.58□□□□□ -2.16
CBX1P83916 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
CBX1P83916 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
CBX1P83916 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.58□□□□□ -2.16
CBX1P83916 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.58□□□□□ -2.16
CBX1P83916 CETN4P-201ENST00000432407 469 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms