Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
TPM4P67936 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.73□□□□□ -2.29
TPM4P67936 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TPM4P67936 FGF7P8-201ENST00000402994 292 ntBASIC0.72□□□□□ -2.29
TPM4P67936 RNU6-1245P-201ENST00000411130 106 ntBASIC0.72□□□□□ -2.29
TPM4P67936 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.72□□□□□ -2.29
TPM4P67936 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.72□□□□□ -2.29
TPM4P67936 AC243964.1-201ENST00000441814 261 ntBASIC0.72□□□□□ -2.29
TPM4P67936 RPL39P38-201ENST00000467018 153 ntBASIC0.72□□□□□ -2.29
TPM4P67936 AP000797.1-201ENST00000478870 387 ntBASIC0.72□□□□□ -2.29
TPM4P67936 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.72□□□□□ -2.29
TPM4P67936 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.72□□□□□ -2.29
TPM4P67936 RNA5SP168-201ENST00000516642 112 ntBASIC0.72□□□□□ -2.29
TPM4P67936 RN7SKP49-201ENST00000516675 260 ntBASIC0.72□□□□□ -2.29
TPM4P67936 RNU6-856P-201ENST00000516959 98 ntBASIC0.72□□□□□ -2.29
TPM4P67936 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.72□□□□□ -2.29
TPM4P67936 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.72□□□□□ -2.29
TPM4P67936 AL590095.2-201ENST00000604136 117 ntBASIC0.72□□□□□ -2.29
TPM4P67936 AL021368.1-201ENST00000607490 540 ntBASIC0.72□□□□□ -2.29
TPM4P67936 AL133216.2-202ENST00000634512 349 ntBASIC0.72□□□□□ -2.29
TPM4P67936 MTND4P14-201ENST00000435799 1354 ntBASIC0.71□□□□□ -2.3
TPM4P67936 RNU4-79P-201ENST00000362764 141 ntBASIC0.71□□□□□ -2.3
TPM4P67936 RNU6-534P-201ENST00000364877 106 ntBASIC0.71□□□□□ -2.3
TPM4P67936 RPS3AP37-201ENST00000419176 745 ntBASIC0.71□□□□□ -2.3
TPM4P67936 AC063976.4-201ENST00000421971 163 ntBASIC0.71□□□□□ -2.3
TPM4P67936 RAB28P5-201ENST00000427490 651 ntBASIC0.71□□□□□ -2.3
TPM4P67936 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.71□□□□□ -2.3
TPM4P67936 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.71□□□□□ -2.3
TPM4P67936 AC108078.2-201ENST00000510750 236 ntBASIC0.71□□□□□ -2.3
TPM4P67936 MTATP6P15-201ENST00000527233 835 ntBASIC0.71□□□□□ -2.3
TPM4P67936 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.71□□□□□ -2.3
TPM4P67936 AC008751.2-201ENST00000597885 980 ntBASIC0.71□□□□□ -2.3
TPM4P67936 CTHRC1P1-201ENST00000605383 469 ntBASIC0.71□□□□□ -2.3
TPM4P67936 AC121334.2-201ENST00000605387 271 ntBASIC0.71□□□□□ -2.3
TPM4P67936 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.71□□□□□ -2.3
TPM4P67936 AC126177.8-201ENST00000618339 1015 ntBASIC0.71□□□□□ -2.3
TPM4P67936 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.71□□□□□ -2.3
TPM4P67936 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TPM4P67936 RNU6-1141P-201ENST00000364520 107 ntBASIC0.7□□□□□ -2.3
TPM4P67936 RNU6-1257P-201ENST00000384625 110 ntBASIC0.7□□□□□ -2.3
TPM4P67936 MIR92A1-201ENST00000385233 78 ntBASIC0.7□□□□□ -2.3
TPM4P67936 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TPM4P67936 SNORD12-201ENST00000391002 90 ntBASIC0.7□□□□□ -2.3
TPM4P67936 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.7□□□□□ -2.3
TPM4P67936 HIGD1AP15-201ENST00000416198 280 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AL590135.1-201ENST00000422215 156 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AC019205.3-201ENST00000424573 156 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AC244505.5-201ENST00000443639 207 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.7□□□□□ -2.3
TPM4P67936 AC016700.2-201ENST00000446011 156 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.7□□□□□ -2.3
TPM4P67936 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.7□□□□□ -2.3
TPM4P67936 AC015911.1-201ENST00000495111 156 ntBASIC0.7□□□□□ -2.3
TPM4P67936 SNORA31.2-201ENST00000516019 134 ntBASIC0.7□□□□□ -2.3
TPM4P67936 SNORA31.4-201ENST00000516049 129 ntBASIC0.7□□□□□ -2.3
TPM4P67936 RNU6-276P-201ENST00000516114 96 ntBASIC0.7□□□□□ -2.3
TPM4P67936 RNU5F-4P-201ENST00000516581 114 ntBASIC0.7□□□□□ -2.3
TPM4P67936 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.7□□□□□ -2.3
TPM4P67936 ZNF321P-202ENST00000550843 495 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AC021231.3-201ENST00000558497 370 ntBASIC0.7□□□□□ -2.3
TPM4P67936 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.7□□□□□ -2.3
TPM4P67936 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.7□□□□□ -2.3
TPM4P67936 AC006927.4-201ENST00000639187 543 ntBASIC0.7□□□□□ -2.3
TPM4P67936 U3.9-201ENST00000363823 204 ntBASIC0.69□□□□□ -2.3
TPM4P67936 RNU4-56P-201ENST00000364700 142 ntBASIC0.69□□□□□ -2.3
TPM4P67936 RNU6-43P-201ENST00000384302 107 ntBASIC0.69□□□□□ -2.3
TPM4P67936 RNU6-910P-201ENST00000390844 107 ntBASIC0.69□□□□□ -2.3
TPM4P67936 AC114491.1-201ENST00000416095 246 ntBASIC0.69□□□□□ -2.3
TPM4P67936 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.69□□□□□ -2.3
TPM4P67936 AC244670.1-201ENST00000436879 112 ntBASIC0.69□□□□□ -2.3
TPM4P67936 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.69□□□□□ -2.3
TPM4P67936 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.69□□□□□ -2.3
TPM4P67936 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.69□□□□□ -2.3
TPM4P67936 RNU7-34P-201ENST00000459394 64 ntBASIC0.69□□□□□ -2.3
TPM4P67936 RNU6-322P-201ENST00000516010 103 ntBASIC0.69□□□□□ -2.3
TPM4P67936 SNORA19.3-201ENST00000516165 130 ntBASIC0.69□□□□□ -2.3
TPM4P67936 RN7SKP265-201ENST00000516448 223 ntBASIC0.69□□□□□ -2.3
TPM4P67936 AC090142.3-201ENST00000519012 385 ntBASIC0.69□□□□□ -2.3
TPM4P67936 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.69□□□□□ -2.3
TPM4P67936 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.69□□□□□ -2.3
TPM4P67936 MIR5692A1-201ENST00000580523 69 ntBASIC0.69□□□□□ -2.3
TPM4P67936 MIR3118-1-201ENST00000581787 76 ntBASIC0.69□□□□□ -2.3
TPM4P67936 AC112187.2-201ENST00000604345 283 ntBASIC0.69□□□□□ -2.3
TPM4P67936 SNORD114-27-201ENST00000363766 70 ntBASIC0.68□□□□□ -2.3
TPM4P67936 RNU6-392P-201ENST00000364926 101 ntBASIC0.68□□□□□ -2.3
TPM4P67936 MIR200A-201ENST00000384875 90 ntBASIC0.68□□□□□ -2.3
TPM4P67936 RNU6-482P-201ENST00000391068 107 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AC002429.1-201ENST00000437672 148 ntBASIC0.68□□□□□ -2.3
TPM4P67936 EEF1A1P39-201ENST00000440791 250 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AC007547.1-201ENST00000462177 490 ntBASIC0.68□□□□□ -2.3
TPM4P67936 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AP001893.2-201ENST00000526949 202 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
TPM4P67936 AC090888.2-201ENST00000559765 1144 ntBASIC0.68□□□□□ -2.3
TPM4P67936 MIR3923-201ENST00000579521 83 ntBASIC0.68□□□□□ -2.3
TPM4P67936 MIR4742-201ENST00000581069 85 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AC022432.1-201ENST00000595739 310 ntBASIC0.68□□□□□ -2.3
TPM4P67936 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.68□□□□□ -2.3
TPM4P67936 PCGEM1.1-201ENST00000613431 131 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms