Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 OR56A5-201ENST00000340110 738 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 RNU4-9P-201ENST00000364951 139 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HERVK_113P62684 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.58□□□□□ -1.84
HERVK_113P62684 EEF1A1P41-201ENST00000414667 207 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 AL358453.1-201ENST00000422522 250 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 AL139132.1-201ENST00000431587 344 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.58□□□□□ -1.84
HERVK_113P62684 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.58□□□□□ -1.84
HERVK_113P62684 snoU13.30-201ENST00000458951 104 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 RPS29P26-201ENST00000477483 171 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.58□□□□□ -1.84
HERVK_113P62684 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.58□□□□□ -1.84
HERVK_113P62684 MIR3609-201ENST00000582661 80 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 AC019159.1-201ENST00000605094 187 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 AC243829.7-201ENST00000633081 225 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HERVK_113P62684 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
HERVK_113P62684 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HERVK_113P62684 AL136164.4-201ENST00000625013 2135 ntBASIC3.58□□□□□ -1.84
HERVK_113P62684 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HERVK_113P62684 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HERVK_113P62684 RNU6-379P-201ENST00000363813 104 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 Y_RNA.376-201ENST00000365638 108 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RNU6-472P-201ENST00000384299 107 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 Y_RNA.483-201ENST00000384380 101 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 MT-TW-201ENST00000387382 68 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 SNORD67-201ENST00000390833 111 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RPL21P75-201ENST00000396599 483 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RPL21P28-201ENST00000401418 483 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.57□□□□□ -1.84
HERVK_113P62684 AC074117.2-201ENST00000417130 397 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 EIF1AXP1-201ENST00000419267 435 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AL590556.1-201ENST00000423231 483 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.57□□□□□ -1.84
HERVK_113P62684 RPEP5-201ENST00000441137 268 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC009296.1-201ENST00000443146 155 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 FCF1P4-201ENST00000448326 183 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.57□□□□□ -1.84
HERVK_113P62684 AL136097.1-201ENST00000456945 913 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 snoU13.28-201ENST00000459235 104 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RPL21P39-201ENST00000463605 483 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC087190.1-201ENST00000484462 480 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC107032.1-201ENST00000485945 480 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.57□□□□□ -1.84
HERVK_113P62684 AC132942.1-201ENST00000486753 483 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC093591.1-201ENST00000491435 481 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RPL23AP75-201ENST00000491601 451 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RPL21P16-201ENST00000495531 483 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AC091826.1-201ENST00000514065 313 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RNA5SP356-201ENST00000515972 94 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RNU6-1143P-201ENST00000516125 104 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RNU6-388P-201ENST00000517012 105 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RNU6-389P-201ENST00000517048 105 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 RNU6-570P-201ENST00000517051 105 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AL391261.3-201ENST00000557194 520 ntBASIC3.57□□□□□ -1.84
HERVK_113P62684 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.57□□□□□ -1.84
HERVK_113P62684 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.57□□□□□ -1.84
HERVK_113P62684 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.57□□□□□ -1.84
HERVK_113P62684 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.56□□□□□ -1.84
HERVK_113P62684 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERVK_113P62684 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HERVK_113P62684 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HERVK_113P62684 MIR22-201ENST00000362190 85 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 Y_RNA.27-201ENST00000362540 103 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 Y_RNA.489-201ENST00000384410 101 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 SNORA1.3-201ENST00000384676 136 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 MIR544A-201ENST00000384855 91 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 MIR32-201ENST00000384965 70 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HERVK_113P62684 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.56□□□□□ -1.84
HERVK_113P62684 AC022018.1-201ENST00000430685 241 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HERVK_113P62684 U8.22-201ENST00000459141 133 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 RPL30P14-201ENST00000482744 348 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 ANXA2P1-201ENST00000505539 926 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.56□□□□□ -1.84
HERVK_113P62684 AL442163.3-201ENST00000554110 156 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 GTF3AP2-201ENST00000557014 266 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 AC010928.2-201ENST00000588017 287 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 HSPE1P7-201ENST00000604681 321 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 AC068831.7-201ENST00000616954 363 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 U6.104-201ENST00000637979 90 ntBASIC3.56□□□□□ -1.84
HERVK_113P62684 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HERVK_113P62684 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HERVK_113P62684 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.56□□□□□ -1.84
HERVK_113P62684 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HERVK_113P62684 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HERVK_113P62684 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
HERVK_113P62684 RNU6-222P-201ENST00000362438 107 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 RNU6-1286P-201ENST00000383871 107 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 Y_RNA.447-201ENST00000384184 113 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.55□□□□□ -1.84
HERVK_113P62684 BPY2DP-201ENST00000422208 265 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 HMGN2P10-201ENST00000448085 265 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 RNU6-1132P-201ENST00000459214 107 ntBASIC3.55□□□□□ -1.84
HERVK_113P62684 RPL30P1-201ENST00000488676 339 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms