Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.21□□□□□ -2.38
LSM3P62310 C1DP2-201ENST00000418167 426 ntBASIC0.21□□□□□ -2.38
LSM3P62310 DAP3P1-201ENST00000441522 278 ntBASIC0.21□□□□□ -2.38
LSM3P62310 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.21□□□□□ -2.38
LSM3P62310 C1DP4-201ENST00000455429 424 ntBASIC0.21□□□□□ -2.38
LSM3P62310 AC016925.1-201ENST00000458303 298 ntBASIC0.21□□□□□ -2.38
LSM3P62310 snoU13.23-201ENST00000458863 104 ntBASIC0.21□□□□□ -2.38
LSM3P62310 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.21□□□□□ -2.38
LSM3P62310 HMGN1P12-201ENST00000499125 195 ntBASIC0.21□□□□□ -2.38
LSM3P62310 RNU6-947P-201ENST00000516264 106 ntBASIC0.21□□□□□ -2.38
LSM3P62310 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.21□□□□□ -2.38
LSM3P62310 MTND2P7-201ENST00000521337 640 ntBASIC0.21□□□□□ -2.38
LSM3P62310 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
LSM3P62310 MIR4781-201ENST00000585250 76 ntBASIC0.21□□□□□ -2.38
LSM3P62310 HMGN1P30-201ENST00000589286 268 ntBASIC0.21□□□□□ -2.38
LSM3P62310 AP002782.1-201ENST00000623107 614 ntBASIC0.21□□□□□ -2.38
LSM3P62310 RNU6-1179P-201ENST00000384667 107 ntBASIC0.2□□□□□ -2.38
LSM3P62310 MIR578-201ENST00000384828 96 ntBASIC0.2□□□□□ -2.38
LSM3P62310 RPL21P1-201ENST00000399532 476 ntBASIC0.2□□□□□ -2.38
LSM3P62310 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
LSM3P62310 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.2□□□□□ -2.38
LSM3P62310 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
LSM3P62310 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.2□□□□□ -2.38
LSM3P62310 SNRPGP7-201ENST00000469016 106 ntBASIC0.2□□□□□ -2.38
LSM3P62310 AC011406.1-201ENST00000512440 370 ntBASIC0.2□□□□□ -2.38
LSM3P62310 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
LSM3P62310 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
LSM3P62310 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.2□□□□□ -2.38
LSM3P62310 APOOP3-201ENST00000536787 586 ntBASIC0.2□□□□□ -2.38
LSM3P62310 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.2□□□□□ -2.38
LSM3P62310 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.2□□□□□ -2.38
LSM3P62310 AC004987.4-201ENST00000603383 338 ntBASIC0.2□□□□□ -2.38
LSM3P62310 AC116165.2-201ENST00000616705 206 ntBASIC0.2□□□□□ -2.38
LSM3P62310 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.2□□□□□ -2.38
LSM3P62310 RMST_7.1-201ENST00000621935 268 ntBASIC0.2□□□□□ -2.38
LSM3P62310 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
LSM3P62310 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
LSM3P62310 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
LSM3P62310 SNORD31B-201ENST00000364977 69 ntBASIC0.19□□□□□ -2.38
LSM3P62310 SNORD41-201ENST00000386967 70 ntBASIC0.19□□□□□ -2.38
LSM3P62310 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
LSM3P62310 SNORA75.2-201ENST00000391138 150 ntBASIC0.19□□□□□ -2.38
LSM3P62310 SNORA75.3-201ENST00000391231 150 ntBASIC0.19□□□□□ -2.38
LSM3P62310 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM3P62310 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.19□□□□□ -2.38
LSM3P62310 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM3P62310 AL606517.2-201ENST00000442855 241 ntBASIC0.19□□□□□ -2.38
LSM3P62310 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.19□□□□□ -2.38
LSM3P62310 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
LSM3P62310 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM3P62310 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.19□□□□□ -2.38
LSM3P62310 AC113410.1-201ENST00000505029 247 ntBASIC0.19□□□□□ -2.38
LSM3P62310 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM3P62310 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM3P62310 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.19□□□□□ -2.38
LSM3P62310 AL603839.4-201ENST00000624658 1005 ntBASIC0.19□□□□□ -2.38
LSM3P62310 MIR5087-201ENST00000635826 76 ntBASIC0.19□□□□□ -2.38
LSM3P62310 MIR338-201ENST00000636369 67 ntBASIC0.19□□□□□ -2.38
LSM3P62310 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
LSM3P62310 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
LSM3P62310 RNU5B-4P-201ENST00000363508 111 ntBASIC0.18□□□□□ -2.38
LSM3P62310 RNY3P13-201ENST00000365542 102 ntBASIC0.18□□□□□ -2.38
LSM3P62310 RNU6-418P-201ENST00000384035 107 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AL355796.1-201ENST00000406706 323 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.18□□□□□ -2.38
LSM3P62310 AL031779.1-201ENST00000415663 330 ntBASIC0.18□□□□□ -2.38
LSM3P62310 UBE2D3P3-201ENST00000426992 425 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC092473.1-201ENST00000441098 221 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.18□□□□□ -2.38
LSM3P62310 MTCYBP1-201ENST00000454315 1119 ntBASIC0.18□□□□□ -2.38
LSM3P62310 RNU7-21P-201ENST00000459430 62 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC104806.1-201ENST00000508720 308 ntBASIC0.18□□□□□ -2.38
LSM3P62310 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
LSM3P62310 RNU1-86P-201ENST00000516108 154 ntBASIC0.18□□□□□ -2.38
LSM3P62310 SNORA31.10-201ENST00000516482 106 ntBASIC0.18□□□□□ -2.38
LSM3P62310 RNU1-107P-201ENST00000516617 154 ntBASIC0.18□□□□□ -2.38
LSM3P62310 RNU6-856P-201ENST00000516959 98 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AP002453.2-201ENST00000533503 320 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC092451.2-201ENST00000538746 658 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.18□□□□□ -2.38
LSM3P62310 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC026585.1-201ENST00000619582 524 ntBASIC0.18□□□□□ -2.38
LSM3P62310 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.18□□□□□ -2.38
LSM3P62310 RNU6-511P-201ENST00000363496 107 ntBASIC0.17□□□□□ -2.38
LSM3P62310 RNU6-236P-201ENST00000363886 106 ntBASIC0.17□□□□□ -2.38
LSM3P62310 RNU5E-6P-201ENST00000365574 115 ntBASIC0.17□□□□□ -2.38
LSM3P62310 SNORA40.2-201ENST00000390847 128 ntBASIC0.17□□□□□ -2.38
LSM3P62310 ELOCP17-201ENST00000414751 326 ntBASIC0.17□□□□□ -2.38
LSM3P62310 MTND4P20-201ENST00000424125 869 ntBASIC0.17□□□□□ -2.38
LSM3P62310 RPL23AP30-201ENST00000432419 501 ntBASIC0.17□□□□□ -2.38
LSM3P62310 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.17□□□□□ -2.38
LSM3P62310 AC233266.1-201ENST00000454518 96 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC006026.2-201ENST00000457376 180 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AP000797.1-201ENST00000478870 387 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC021146.8-201ENST00000507455 733 ntBASIC0.17□□□□□ -2.38
LSM3P62310 TRMT112P2-201ENST00000512910 132 ntBASIC0.17□□□□□ -2.38
LSM3P62310 RNU5F-4P-201ENST00000516581 114 ntBASIC0.17□□□□□ -2.38
LSM3P62310 AC023050.2-201ENST00000544968 387 ntBASIC0.17□□□□□ -2.38
LSM3P62310 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.17□□□□□ -2.38
LSM3P62310 AL606834.3-201ENST00000602615 496 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms