Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.41□□□□□ -1.86
GFRA1P56159 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.41□□□□□ -1.86
GFRA1P56159 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.41□□□□□ -1.86
GFRA1P56159 AC009779.6-201ENST00000603972 165 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AL137849.1-201ENST00000604767 169 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 SNORA62.6-201ENST00000606322 83 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.41□□□□□ -1.86
GFRA1P56159 AC006133.1-201ENST00000617106 264 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AC005562.2-201ENST00000618264 111 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 IGHVIII-44-202ENST00000636235 289 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AC012442.3-202ENST00000636742 206 ntBASIC3.41□□□□□ -1.86
GFRA1P56159 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.41□□□□□ -1.86
GFRA1P56159 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
GFRA1P56159 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.4□□□□□ -1.86
GFRA1P56159 AC069528.2-201ENST00000624849 1991 ntBASIC3.4□□□□□ -1.86
GFRA1P56159 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
GFRA1P56159 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
GFRA1P56159 SNORA25.1-201ENST00000362326 128 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 RNU6-727P-201ENST00000363592 107 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 Y_RNA.331-201ENST00000365267 102 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 RNU6-1083P-201ENST00000384022 107 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 PTMAP2-201ENST00000397627 327 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 RNU2-64P-201ENST00000411315 191 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.4□□□□□ -1.87
GFRA1P56159 AC009414.1-201ENST00000427200 443 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.4□□□□□ -1.87
GFRA1P56159 RNU6-138P-201ENST00000515952 107 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 MIR2114-201ENST00000516645 80 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
GFRA1P56159 AL360157.1-201ENST00000565962 87 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.4□□□□□ -1.87
GFRA1P56159 MIR4765-201ENST00000585007 77 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.4□□□□□ -1.87
GFRA1P56159 AC018692.3-201ENST00000623929 123 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 AC110079.1-202ENST00000635213 138 ntBASIC3.4□□□□□ -1.87
GFRA1P56159 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
GFRA1P56159 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.4□□□□□ -1.87
GFRA1P56159 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
GFRA1P56159 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
GFRA1P56159 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA1P56159 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.39□□□□□ -1.87
GFRA1P56159 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA1P56159 FAM35DP-201ENST00000323387 2712 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA1P56159 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA1P56159 snoU2_19.1-201ENST00000362361 80 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 Y_RNA.44-201ENST00000362676 108 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 SNORA62.3-201ENST00000365110 153 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
GFRA1P56159 RNU6-1310P-201ENST00000384153 107 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 SNORA46.1-201ENST00000391069 153 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 RNU1-101P-201ENST00000391171 127 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 SNORA48.7-201ENST00000391302 135 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 SNORD58.1-201ENST00000391313 66 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 RAB28P5-201ENST00000427490 651 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 AC027124.2-201ENST00000428249 105 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.39□□□□□ -1.87
GFRA1P56159 POLR2KP2-201ENST00000438155 177 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 AC005042.3-201ENST00000453230 174 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 AC006445.1-201ENST00000491925 405 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 RNA5SP112-201ENST00000515937 99 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.39□□□□□ -1.87
GFRA1P56159 TCL6_2.1-201ENST00000615162 119 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
GFRA1P56159 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA1P56159 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
GFRA1P56159 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.39□□□□□ -1.87
GFRA1P56159 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.39□□□□□ -1.87
GFRA1P56159 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.38□□□□□ -1.87
GFRA1P56159 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
GFRA1P56159 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GFRA1P56159 MTND5P15-201ENST00000434246 349 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.38□□□□□ -1.87
GFRA1P56159 AC091179.1-201ENST00000461606 579 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 RNA5SP208-201ENST00000516156 78 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 Y_RNA.700-201ENST00000516806 100 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 AC103810.1-201ENST00000579873 453 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.38□□□□□ -1.87
GFRA1P56159 AC008749.1-201ENST00000597650 306 ntBASIC3.38□□□□□ -1.87
GFRA1P56159 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
GFRA1P56159 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
GFRA1P56159 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
GFRA1P56159 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GFRA1P56159 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GFRA1P56159 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
GFRA1P56159 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.37□□□□□ -1.87
GFRA1P56159 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.37□□□□□ -1.87
GFRA1P56159 AC091152.2-201ENST00000591628 2569 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.37□□□□□ -1.87
GFRA1P56159 RNA5SP197-201ENST00000363357 119 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 RNY1-201ENST00000364228 113 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
GFRA1P56159 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 EIF4EP4-201ENST00000424916 578 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 AC004386.2-201ENST00000441858 148 ntBASIC3.37□□□□□ -1.87
GFRA1P56159 RNU1-95P-201ENST00000516357 160 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 706.9 ms