Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC060766.3-201ENST00000591442 263 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 AL359757.2-201ENST00000624309 274 ntBASIC2.68□□□□□ -1.98
NR1H2P55055 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NR1H2P55055 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.68□□□□□ -1.98
NR1H2P55055 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
NR1H2P55055 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.68□□□□□ -1.98
NR1H2P55055 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NR1H2P55055 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.67□□□□□ -1.98
NR1H2P55055 MIR6073-201ENST00000352083 89 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
NR1H2P55055 MIR22-201ENST00000362190 85 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 Y_RNA.40-201ENST00000362645 93 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 U3.13-201ENST00000364804 214 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 RNA5SP126-201ENST00000365092 109 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 Y_RNA.384-201ENST00000383909 102 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 RNU6-142P-201ENST00000384019 107 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 Y_RNA.473-201ENST00000384333 102 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 Y_RNA.482-201ENST00000384377 111 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 MIR512-1-201ENST00000384913 84 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 USP9YP30-201ENST00000430729 455 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AL133396.1-201ENST00000432048 687 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NR1H2P55055 RN7SL429P-201ENST00000479090 223 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 RN7SL489P-201ENST00000486185 223 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 RN7SL327P-201ENST00000488659 223 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AC083906.5-201ENST00000503722 328 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 Y_RNA.675-201ENST00000516389 149 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 RNU6-1016P-201ENST00000516689 94 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 RNU6-567P-201ENST00000516746 107 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.67□□□□□ -1.98
NR1H2P55055 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NR1H2P55055 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 MIR4672-201ENST00000583126 81 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 MIR4795-201ENST00000584182 89 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.67□□□□□ -1.98
NR1H2P55055 RPL12P50-201ENST00000603116 116 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 C8orf59P2-201ENST00000603441 271 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AC018889.1-201ENST00000605372 397 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AC116312.1-201ENST00000606841 314 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 RN7SL853P-201ENST00000617250 223 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.67□□□□□ -1.98
NR1H2P55055 AC090517.3-201ENST00000625170 141 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.67□□□□□ -1.98
NR1H2P55055 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NR1H2P55055 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H2P55055 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.66□□□□□ -1.98
NR1H2P55055 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H2P55055 AP006437.1-201ENST00000641440 3685 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 RNU6-227P-201ENST00000362865 103 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.66□□□□□ -1.98
NR1H2P55055 Y_RNA.387-201ENST00000383918 102 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 RNU6-851P-201ENST00000384565 107 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 EIF1AXP1-201ENST00000419267 435 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
NR1H2P55055 RPL23AP95-201ENST00000426806 265 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.66□□□□□ -1.98
NR1H2P55055 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.66□□□□□ -1.98
NR1H2P55055 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.66□□□□□ -1.98
NR1H2P55055 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 AL031659.1-201ENST00000447075 539 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.66□□□□□ -1.98
NR1H2P55055 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.66□□□□□ -1.98
NR1H2P55055 RPS29P27-201ENST00000463711 170 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 RNU6-559P-201ENST00000516151 98 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 HSPE1P4-201ENST00000550617 308 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 AC007375.1-201ENST00000554513 578 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 AL359697.1-201ENST00000624879 587 ntBASIC2.66□□□□□ -1.98
NR1H2P55055 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
NR1H2P55055 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
NR1H2P55055 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NR1H2P55055 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.65□□□□□ -1.98
NR1H2P55055 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
NR1H2P55055 Y_RNA.58-201ENST00000362807 102 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 Y_RNA.67-201ENST00000362870 100 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNU6-797P-201ENST00000363101 109 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 Y_RNA.154-201ENST00000363624 102 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNU6-1059P-201ENST00000363752 98 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNU6-593P-201ENST00000364716 112 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 SNORD32A-201ENST00000364805 84 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNY3P1-201ENST00000365085 102 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNY3-201ENST00000365484 102 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 Y_RNA.490-201ENST00000384413 102 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNU6-370P-201ENST00000411008 104 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 RNU6-1304P-201ENST00000411374 106 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 EEF1A1P41-201ENST00000414667 207 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 MTND3P23-201ENST00000431980 347 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 DAP3P1-201ENST00000441522 278 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
NR1H2P55055 HMGB1P35-201ENST00000503360 598 ntBASIC2.65□□□□□ -1.99
NR1H2P55055 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.65□□□□□ -1.99
NR1H2P55055 AC008549.1-201ENST00000512900 643 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms