Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.45□□□□□ -1.86
ATXN1P54253 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
ATXN1P54253 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATXN1P54253 AC010680.1-201ENST00000590024 3590 ntBASIC3.45□□□□□ -1.86
ATXN1P54253 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.44□□□□□ -1.86
ATXN1P54253 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATXN1P54253 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATXN1P54253 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
ATXN1P54253 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATXN1P54253 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ATXN1P54253 Y_RNA.16-201ENST00000362421 102 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 Y_RNA.48-201ENST00000362710 103 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 SNORA63.4-201ENST00000362763 126 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.44□□□□□ -1.86
ATXN1P54253 RNU6-217P-201ENST00000384164 104 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 RNU6-140P-201ENST00000384566 108 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 RNU2-25P-201ENST00000411041 191 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 BX679664.1-201ENST00000434429 253 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 RPL23AP67-201ENST00000465341 474 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 AC091021.1-201ENST00000468051 388 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.44□□□□□ -1.86
ATXN1P54253 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.44□□□□□ -1.86
ATXN1P54253 AC116337.1-201ENST00000509680 687 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.44□□□□□ -1.86
ATXN1P54253 AL590240.4-201ENST00000616908 390 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.44□□□□□ -1.86
ATXN1P54253 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.44□□□□□ -1.86
ATXN1P54253 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATXN1P54253 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.43□□□□□ -1.86
ATXN1P54253 MIR411-201ENST00000362239 96 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 Y_RNA.39-201ENST00000362620 98 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 Y_RNA.76-201ENST00000362931 109 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 RNU6-151P-201ENST00000364158 107 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 Y_RNA.383-201ENST00000383855 97 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 RNU6-131P-201ENST00000391144 107 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 MIR548H3-201ENST00000408771 118 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 CYCSP33-201ENST00000414485 327 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.43□□□□□ -1.86
ATXN1P54253 USP9YP30-201ENST00000430729 455 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AL121890.1-201ENST00000435457 205 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.43□□□□□ -1.86
ATXN1P54253 HMGB3P8-201ENST00000449709 577 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AC010401.1-201ENST00000463867 348 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.43□□□□□ -1.86
ATXN1P54253 RNA5SP272-201ENST00000516095 111 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 RNU4-71P-201ENST00000516258 113 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 MIR892C-201ENST00000516410 77 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 RNU6-62P-201ENST00000516526 102 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 DEFB108E-201ENST00000524692 240 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 TRAV37-201ENST00000553906 342 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AC109446.1-201ENST00000566172 220 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AC011494.1-201ENST00000596454 237 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 RNU6-85P-201ENST00000605989 107 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 AC005520.5-201ENST00000613926 164 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.43□□□□□ -1.86
ATXN1P54253 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.43□□□□□ -1.86
ATXN1P54253 HAUS6P2-201ENST00000433254 2404 ntBASIC3.43□□□□□ -1.86
ATXN1P54253 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATXN1P54253 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
ATXN1P54253 GABRG2-229ENST00000641017 3628 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.42□□□□□ -1.86
ATXN1P54253 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATXN1P54253 AC017071.1-201ENST00000564407 2204 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.42□□□□□ -1.86
ATXN1P54253 MIR412-201ENST00000362142 91 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 snoU2_19.2-201ENST00000363024 80 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RNU6-593P-201ENST00000364716 112 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 Y_RNA.314-201ENST00000365114 102 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 Y_RNA.324-201ENST00000365165 102 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RNA5SP293-201ENST00000410527 113 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.42□□□□□ -1.86
ATXN1P54253 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.42□□□□□ -1.86
ATXN1P54253 TRIAP1P1-201ENST00000427062 225 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 FCF1P4-201ENST00000448326 183 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AC006445.1-201ENST00000491925 405 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AC096745.1-201ENST00000509945 370 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.42□□□□□ -1.86
ATXN1P54253 AC074133.1-201ENST00000515696 183 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RNU1-86P-201ENST00000516108 154 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RNU1-107P-201ENST00000516617 154 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RNU6-919P-201ENST00000516731 104 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RNU1-54P-201ENST00000517181 120 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.42□□□□□ -1.86
ATXN1P54253 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
ATXN1P54253 AC112693.2-201ENST00000556538 232 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 MIR3162-201ENST00000581818 82 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 uc_338.1-201ENST00000612113 180 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 RMST_4.1-201ENST00000616886 107 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AC130454.1-201ENST00000622948 401 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.42□□□□□ -1.86
ATXN1P54253 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
ATXN1P54253 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATXN1P54253 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATXN1P54253 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATXN1P54253 AC100821.1-201ENST00000523153 2479 ntBASIC3.42□□□□□ -1.86
ATXN1P54253 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
ATXN1P54253 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms