Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SNORD5.1-201ENST00000458800 75 ntBASIC2.56□□□□□ -2
CLCNKAP51800 SNRPGP7-201ENST00000469016 106 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.56□□□□□ -2
CLCNKAP51800 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.56□□□□□ -2
CLCNKAP51800 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.56□□□□□ -2
CLCNKAP51800 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.56□□□□□ -2
CLCNKAP51800 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.56□□□□□ -2
CLCNKAP51800 VN1R107P-201ENST00000601784 209 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AP001836.1-201ENST00000604675 523 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AL133255.1-201ENST00000606374 441 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC084781.2-201ENST00000615568 161 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC024581.2-201ENST00000619986 252 ntBASIC2.56□□□□□ -2
CLCNKAP51800 AC131280.1-202ENST00000624067 4211 ntBASIC2.56□□□□□ -2
CLCNKAP51800 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.56□□□□□ -2
CLCNKAP51800 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.55□□□□□ -2
CLCNKAP51800 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCNKAP51800 RNA5SP68-201ENST00000363885 119 ntBASIC2.55□□□□□ -2
CLCNKAP51800 U8.8-201ENST00000365399 135 ntBASIC2.55□□□□□ -2
CLCNKAP51800 RNU6-310P-201ENST00000384655 107 ntBASIC2.55□□□□□ -2
CLCNKAP51800 MTCYBP4-201ENST00000401524 249 ntBASIC2.55□□□□□ -2
CLCNKAP51800 Y_RNA.646-201ENST00000410980 101 ntBASIC2.55□□□□□ -2
CLCNKAP51800 RNU6-1245P-201ENST00000411130 106 ntBASIC2.55□□□□□ -2
CLCNKAP51800 HAUS6P2-201ENST00000433254 2404 ntBASIC2.55□□□□□ -2
CLCNKAP51800 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.55□□□□□ -2
CLCNKAP51800 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLCNKAP51800 RPL30P15-201ENST00000457129 321 ntBASIC2.55□□□□□ -2
CLCNKAP51800 RPL30P12-201ENST00000474666 353 ntBASIC2.55□□□□□ -2
CLCNKAP51800 FO393415.2-201ENST00000480085 343 ntBASIC2.55□□□□□ -2
CLCNKAP51800 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.55□□□□□ -2
CLCNKAP51800 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
CLCNKAP51800 AC091874.1-201ENST00000511402 339 ntBASIC2.55□□□□□ -2
CLCNKAP51800 SNORA25.11-201ENST00000515935 105 ntBASIC2.55□□□□□ -2
CLCNKAP51800 ACA59.1-201ENST00000515966 143 ntBASIC2.55□□□□□ -2
CLCNKAP51800 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.55□□□□□ -2
CLCNKAP51800 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
CLCNKAP51800 AC090897.2-201ENST00000581715 130 ntBASIC2.55□□□□□ -2
CLCNKAP51800 RPS15AP11-201ENST00000594193 385 ntBASIC2.55□□□□□ -2
CLCNKAP51800 PISRT1.1-201ENST00000616930 107 ntBASIC2.55□□□□□ -2
CLCNKAP51800 AC126177.8-201ENST00000618339 1015 ntBASIC2.55□□□□□ -2
CLCNKAP51800 AC098657.3-201ENST00000620434 263 ntBASIC2.55□□□□□ -2
CLCNKAP51800 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.55□□□□□ -2
CLCNKAP51800 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
CLCNKAP51800 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CLCNKAP51800 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.54□□□□□ -2
CLCNKAP51800 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CLCNKAP51800 RNU6-227P-201ENST00000362865 103 ntBASIC2.54□□□□□ -2
CLCNKAP51800 Y_RNA.123-201ENST00000363338 102 ntBASIC2.54□□□□□ -2
CLCNKAP51800 Y_RNA.813-201ENST00000364639 102 ntBASIC2.54□□□□□ -2
CLCNKAP51800 RNU6-487P-201ENST00000365430 104 ntBASIC2.54□□□□□ -2
CLCNKAP51800 Y_RNA.394-201ENST00000383942 103 ntBASIC2.54□□□□□ -2
CLCNKAP51800 RNU6-1083P-201ENST00000384022 107 ntBASIC2.54□□□□□ -2
CLCNKAP51800 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
CLCNKAP51800 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLCNKAP51800 MTCO2P27-201ENST00000420740 428 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AF228730.4-201ENST00000421457 183 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC236972.2-201ENST00000434979 310 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.54□□□□□ -2
CLCNKAP51800 AC124916.1-201ENST00000444020 547 ntBASIC2.54□□□□□ -2
CLCNKAP51800 UBE2V1P7-201ENST00000446395 340 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
CLCNKAP51800 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.54□□□□□ -2
CLCNKAP51800 RNU5B-3P-201ENST00000516601 115 ntBASIC2.54□□□□□ -2
CLCNKAP51800 RNA5SP384-201ENST00000516615 116 ntBASIC2.54□□□□□ -2
CLCNKAP51800 RNU1-104P-201ENST00000517280 175 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
CLCNKAP51800 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC078795.3-201ENST00000602913 472 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC018889.1-201ENST00000605372 397 ntBASIC2.54□□□□□ -2
CLCNKAP51800 MIR8076-201ENST00000611401 83 ntBASIC2.54□□□□□ -2
CLCNKAP51800 MIR6817-201ENST00000615588 66 ntBASIC2.54□□□□□ -2
CLCNKAP51800 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC090574.1-201ENST00000623186 233 ntBASIC2.54□□□□□ -2
CLCNKAP51800 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CLCNKAP51800 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLCNKAP51800 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.54□□□□□ -2
CLCNKAP51800 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.53□□□□□ -2
CLCNKAP51800 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLCNKAP51800 Y_RNA.2-201ENST00000362330 96 ntBASIC2.53□□□□□ -2
CLCNKAP51800 Y_RNA.11-201ENST00000362375 109 ntBASIC2.53□□□□□ -2
CLCNKAP51800 Y_RNA.48-201ENST00000362710 103 ntBASIC2.53□□□□□ -2
CLCNKAP51800 RNU6-331P-201ENST00000384724 107 ntBASIC2.53□□□□□ -2
CLCNKAP51800 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.53□□□□□ -2
CLCNKAP51800 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
CLCNKAP51800 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.53□□□□□ -2
CLCNKAP51800 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.53□□□□□ -2
CLCNKAP51800 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
CLCNKAP51800 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.53□□□□□ -2
CLCNKAP51800 AL441985.1-201ENST00000457727 251 ntBASIC2.53□□□□□ -2
CLCNKAP51800 Y_RNA.653-201ENST00000459091 95 ntBASIC2.53□□□□□ -2
CLCNKAP51800 SRIP1-201ENST00000489235 288 ntBASIC2.53□□□□□ -2
CLCNKAP51800 HMGN1P13-201ENST00000505795 138 ntBASIC2.53□□□□□ -2
CLCNKAP51800 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.53□□□□□ -2
CLCNKAP51800 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.53□□□□□ -2
CLCNKAP51800 CKS1BP7-201ENST00000522230 235 ntBASIC2.53□□□□□ -2
CLCNKAP51800 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.53□□□□□ -2
CLCNKAP51800 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
CLCNKAP51800 MIR5690-201ENST00000583739 73 ntBASIC2.53□□□□□ -2
CLCNKAP51800 AC010297.1-201ENST00000623948 149 ntBASIC2.53□□□□□ -2
CLCNKAP51800 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CLCNKAP51800 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms