Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.1□□□□□ -1.75
USP11P51784 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.1□□□□□ -1.75
USP11P51784 AC020895.1-201ENST00000595362 272 ntBASIC4.1□□□□□ -1.75
USP11P51784 SNORA51-201ENST00000606420 132 ntBASIC4.1□□□□□ -1.75
USP11P51784 AP002826.1-201ENST00000608835 315 ntBASIC4.1□□□□□ -1.75
USP11P51784 AC091895.1-201ENST00000624494 256 ntBASIC4.1□□□□□ -1.75
USP11P51784 AC048347.1-201ENST00000624621 427 ntBASIC4.1□□□□□ -1.75
USP11P51784 AL034408.1-202ENST00000636088 415 ntBASIC4.1□□□□□ -1.75
USP11P51784 U6.98-201ENST00000637157 84 ntBASIC4.1□□□□□ -1.75
USP11P51784 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.1□□□□□ -1.75
USP11P51784 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
USP11P51784 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP11P51784 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP11P51784 RNU6-137P-201ENST00000363680 108 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNA5SP189-201ENST00000364920 115 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNU6-449P-201ENST00000383914 107 ntBASIC4.09□□□□□ -1.75
USP11P51784 SNORA36A-201ENST00000384221 132 ntBASIC4.09□□□□□ -1.75
USP11P51784 Y_RNA.488-201ENST00000384403 102 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNU6-417P-201ENST00000384712 107 ntBASIC4.09□□□□□ -1.75
USP11P51784 U3.19-201ENST00000390893 196 ntBASIC4.09□□□□□ -1.75
USP11P51784 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.09□□□□□ -1.75
USP11P51784 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.09□□□□□ -1.75
USP11P51784 AC010095.1-201ENST00000443543 144 ntBASIC4.09□□□□□ -1.75
USP11P51784 RPL23AP14-201ENST00000468281 468 ntBASIC4.09□□□□□ -1.75
USP11P51784 AC005921.1-201ENST00000510589 286 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNA5SP272-201ENST00000516095 111 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNU6-191P-201ENST00000516295 94 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNU6-1231P-201ENST00000517185 103 ntBASIC4.09□□□□□ -1.75
USP11P51784 RNA5SP291-201ENST00000517222 105 ntBASIC4.09□□□□□ -1.75
USP11P51784 LINC00933-203ENST00000559812 219 ntBASIC4.09□□□□□ -1.75
USP11P51784 MIR3186-201ENST00000577404 85 ntBASIC4.09□□□□□ -1.75
USP11P51784 MIR3944-201ENST00000581277 108 ntBASIC4.09□□□□□ -1.75
USP11P51784 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.09□□□□□ -1.75
USP11P51784 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
USP11P51784 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
USP11P51784 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
USP11P51784 ZNF204P-201ENST00000416749 2397 ntBASIC4.09□□□□□ -1.76
USP11P51784 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.08□□□□□ -1.76
USP11P51784 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP11P51784 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
USP11P51784 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP11P51784 RNU4-80P-201ENST00000363200 141 ntBASIC4.08□□□□□ -1.76
USP11P51784 SNORD115-8-201ENST00000363856 82 ntBASIC4.08□□□□□ -1.76
USP11P51784 Y_RNA.215-201ENST00000364204 112 ntBASIC4.08□□□□□ -1.76
USP11P51784 RNA5SP42-201ENST00000364278 115 ntBASIC4.08□□□□□ -1.76
USP11P51784 SNORD115-38-201ENST00000365037 82 ntBASIC4.08□□□□□ -1.76
USP11P51784 MIR1290-201ENST00000408735 78 ntBASIC4.08□□□□□ -1.76
USP11P51784 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
USP11P51784 AC092047.1-201ENST00000424997 240 ntBASIC4.08□□□□□ -1.76
USP11P51784 AC006989.1-201ENST00000427212 131 ntBASIC4.08□□□□□ -1.76
USP11P51784 ARF4P2-201ENST00000430209 526 ntBASIC4.08□□□□□ -1.76
USP11P51784 AL512844.2-201ENST00000433990 593 ntBASIC4.08□□□□□ -1.76
USP11P51784 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.08□□□□□ -1.76
USP11P51784 AC007969.2-201ENST00000441891 191 ntBASIC4.08□□□□□ -1.76
USP11P51784 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.08□□□□□ -1.76
USP11P51784 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.08□□□□□ -1.76
USP11P51784 AC104619.4-201ENST00000510773 249 ntBASIC4.08□□□□□ -1.76
USP11P51784 RNU5F-8P-201ENST00000515941 111 ntBASIC4.08□□□□□ -1.76
USP11P51784 SNORA31.8-201ENST00000516327 108 ntBASIC4.08□□□□□ -1.76
USP11P51784 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.08□□□□□ -1.76
USP11P51784 MIR5571-201ENST00000577998 113 ntBASIC4.08□□□□□ -1.76
USP11P51784 MIR3145-201ENST00000580727 82 ntBASIC4.08□□□□□ -1.76
USP11P51784 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.08□□□□□ -1.76
USP11P51784 AL008718.3-201ENST00000610217 321 ntBASIC4.08□□□□□ -1.76
USP11P51784 U2.21-201ENST00000637295 81 ntBASIC4.08□□□□□ -1.76
USP11P51784 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.08□□□□□ -1.76
USP11P51784 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.08□□□□□ -1.76
USP11P51784 MFSD8-236ENST00000641509 4050 ntBASIC4.08□□□□□ -1.76
USP11P51784 AC006504.1-201ENST00000562493 3666 ntBASIC4.08□□□□□ -1.76
USP11P51784 AL109809.4-201ENST00000603520 2185 ntBASIC4.07□□□□□ -1.76
USP11P51784 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP11P51784 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
USP11P51784 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP11P51784 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP11P51784 MIR208A-201ENST00000362287 71 ntBASIC4.07□□□□□ -1.76
USP11P51784 Y_RNA.101-201ENST00000363154 102 ntBASIC4.07□□□□□ -1.76
USP11P51784 Y_RNA.412-201ENST00000384001 104 ntBASIC4.07□□□□□ -1.76
USP11P51784 RNU6-658P-201ENST00000384606 106 ntBASIC4.07□□□□□ -1.76
USP11P51784 AC138623.1-201ENST00000418060 216 ntBASIC4.07□□□□□ -1.76
USP11P51784 VDAC1P3-201ENST00000434069 851 ntBASIC4.07□□□□□ -1.76
USP11P51784 RPS15AP5-201ENST00000436276 388 ntBASIC4.07□□□□□ -1.76
USP11P51784 HMGB3P8-201ENST00000449709 577 ntBASIC4.07□□□□□ -1.76
USP11P51784 RNU2-58P-201ENST00000516403 183 ntBASIC4.07□□□□□ -1.76
USP11P51784 RNU6-426P-201ENST00000516464 97 ntBASIC4.07□□□□□ -1.76
USP11P51784 SNORD116-25-201ENST00000516517 92 ntBASIC4.07□□□□□ -1.76
USP11P51784 AP004242.1-201ENST00000533701 349 ntBASIC4.07□□□□□ -1.76
USP11P51784 AC016256.1-201ENST00000547971 354 ntBASIC4.07□□□□□ -1.76
USP11P51784 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.07□□□□□ -1.76
USP11P51784 AL133393.1-201ENST00000603277 287 ntBASIC4.07□□□□□ -1.76
USP11P51784 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.07□□□□□ -1.76
USP11P51784 AP003355.3-201ENST00000623465 114 ntBASIC4.07□□□□□ -1.76
USP11P51784 AC100821.1-201ENST00000523153 2479 ntBASIC4.07□□□□□ -1.76
USP11P51784 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
USP11P51784 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
USP11P51784 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
USP11P51784 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP11P51784 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP11P51784 AC007656.2-201ENST00000624902 4547 ntBASIC4.06□□□□□ -1.76
USP11P51784 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
USP11P51784 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms