Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL451074.3-201ENST00000437709 472 ntBASIC1.99□□□□□ -2.09
GPC3P51654 AL603825.1-201ENST00000438481 80 ntBASIC1.99□□□□□ -2.09
GPC3P51654 GTF2IP13-201ENST00000438487 386 ntBASIC1.99□□□□□ -2.09
GPC3P51654 PRPS1P1-201ENST00000445305 876 ntBASIC1.99□□□□□ -2.09
GPC3P51654 RPL39P29-201ENST00000447779 157 ntBASIC1.99□□□□□ -2.09
GPC3P51654 AL122001.1-201ENST00000457027 370 ntBASIC1.99□□□□□ -2.09
GPC3P51654 SCARNA18-201ENST00000459004 134 ntBASIC1.99□□□□□ -2.09
GPC3P51654 AP005435.4-201ENST00000529514 284 ntBASIC1.99□□□□□ -2.09
GPC3P51654 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC3P51654 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
GPC3P51654 MTND1P15-201ENST00000579262 949 ntBASIC1.99□□□□□ -2.09
GPC3P51654 AC091135.1-201ENST00000585943 307 ntBASIC1.99□□□□□ -2.09
GPC3P51654 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.99□□□□□ -2.09
GPC3P51654 AP001330.5-201ENST00000607176 411 ntBASIC1.99□□□□□ -2.09
GPC3P51654 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.99□□□□□ -2.09
GPC3P51654 AL132822.1-201ENST00000617063 513 ntBASIC1.99□□□□□ -2.09
GPC3P51654 RMST_7.1-201ENST00000621935 268 ntBASIC1.99□□□□□ -2.09
GPC3P51654 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
GPC3P51654 Y_RNA.255-201ENST00000364581 97 ntBASIC1.98□□□□□ -2.09
GPC3P51654 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
GPC3P51654 RNU6-1127P-201ENST00000384580 107 ntBASIC1.98□□□□□ -2.09
GPC3P51654 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
GPC3P51654 RNU6-261P-201ENST00000459506 102 ntBASIC1.98□□□□□ -2.09
GPC3P51654 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.98□□□□□ -2.09
GPC3P51654 MTCO3P9-201ENST00000506989 781 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.98□□□□□ -2.09
GPC3P51654 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.98□□□□□ -2.09
GPC3P51654 RNU6-250P-201ENST00000516958 103 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AP001893.2-201ENST00000526949 202 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AC115990.1-201ENST00000526957 301 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AP005639.2-201ENST00000527592 928 ntBASIC1.98□□□□□ -2.09
GPC3P51654 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.98□□□□□ -2.09
GPC3P51654 MIR3683-201ENST00000580847 82 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AL078605.1-201ENST00000603529 500 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AL022345.1-201ENST00000607292 135 ntBASIC1.98□□□□□ -2.09
GPC3P51654 U2.17-201ENST00000611454 95 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AL354950.2-201ENST00000617939 290 ntBASIC1.98□□□□□ -2.09
GPC3P51654 AC139792.3-201ENST00000623525 224 ntBASIC1.98□□□□□ -2.09
GPC3P51654 Z69720.2-201ENST00000624755 279 ntBASIC1.98□□□□□ -2.09
GPC3P51654 OR5AK4P-201ENST00000635912 903 ntBASIC1.98□□□□□ -2.09
GPC3P51654 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
GPC3P51654 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
GPC3P51654 RNU6-944P-201ENST00000364023 107 ntBASIC1.97□□□□□ -2.09
GPC3P51654 MIR1262-201ENST00000408276 93 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.97□□□□□ -2.09
GPC3P51654 MTND3P21-201ENST00000433774 331 ntBASIC1.97□□□□□ -2.09
GPC3P51654 MTND1P1-201ENST00000445453 368 ntBASIC1.97□□□□□ -2.09
GPC3P51654 MTCO2P7-201ENST00000446518 666 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.97□□□□□ -2.09
GPC3P51654 AL353752.1-201ENST00000454946 260 ntBASIC1.97□□□□□ -2.09
GPC3P51654 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.97□□□□□ -2.09
GPC3P51654 SRRM1P2-201ENST00000464531 1192 ntBASIC1.97□□□□□ -2.09
GPC3P51654 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
GPC3P51654 RNU2-69P-201ENST00000516061 100 ntBASIC1.97□□□□□ -2.09
GPC3P51654 SNORA40.12-201ENST00000516329 111 ntBASIC1.97□□□□□ -2.09
GPC3P51654 RNU6-965P-201ENST00000516721 96 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AP005660.1-201ENST00000522972 293 ntBASIC1.97□□□□□ -2.09
GPC3P51654 MTND4P7-201ENST00000523876 130 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
GPC3P51654 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.97□□□□□ -2.09
GPC3P51654 HIF1AP1-201ENST00000553642 175 ntBASIC1.97□□□□□ -2.09
GPC3P51654 MTATP6P3-201ENST00000581686 676 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AC008752.3-201ENST00000588113 712 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.97□□□□□ -2.09
GPC3P51654 MIR8081-201ENST00000611533 95 ntBASIC1.97□□□□□ -2.09
GPC3P51654 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
GPC3P51654 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
GPC3P51654 AL158209.2-201ENST00000619266 216 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AL159153.1-201ENST00000619688 317 ntBASIC1.97□□□□□ -2.09
GPC3P51654 AC124864.2-201ENST00000624736 186 ntBASIC1.97□□□□□ -2.09
GPC3P51654 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
GPC3P51654 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.09
GPC3P51654 RNU6-1085P-201ENST00000363576 107 ntBASIC1.96□□□□□ -2.1
GPC3P51654 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
GPC3P51654 RNU6-1158P-201ENST00000391167 107 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AL627390.1-201ENST00000396055 340 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AL606923.1-201ENST00000406616 190 ntBASIC1.96□□□□□ -2.1
GPC3P51654 Y_RNA.597-201ENST00000410463 100 ntBASIC1.96□□□□□ -2.1
GPC3P51654 CYCSP33-201ENST00000414485 327 ntBASIC1.96□□□□□ -2.1
GPC3P51654 MTCO3P41-201ENST00000414801 328 ntBASIC1.96□□□□□ -2.1
GPC3P51654 ARL5AP1-201ENST00000418991 388 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AL358453.1-201ENST00000422522 250 ntBASIC1.96□□□□□ -2.1
GPC3P51654 EIF4EP2-201ENST00000422816 654 ntBASIC1.96□□□□□ -2.1
GPC3P51654 BX510359.4-201ENST00000423750 193 ntBASIC1.96□□□□□ -2.1
GPC3P51654 RPS15AP10-201ENST00000432472 382 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AC073415.1-201ENST00000449240 153 ntBASIC1.96□□□□□ -2.1
GPC3P51654 RNU7-167P-201ENST00000459160 62 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AC083798.1-201ENST00000472671 131 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.96□□□□□ -2.1
GPC3P51654 MTCYBP40-201ENST00000509390 1135 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.96□□□□□ -2.1
GPC3P51654 SNORA25.15-201ENST00000516487 89 ntBASIC1.96□□□□□ -2.1
GPC3P51654 AC007375.1-201ENST00000554513 578 ntBASIC1.96□□□□□ -2.1
GPC3P51654 MIR6863-201ENST00000636112 90 ntBASIC1.96□□□□□ -2.1
GPC3P51654 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.96□□□□□ -2.1
GPC3P51654 RNU6-743P-201ENST00000364151 106 ntBASIC1.95□□□□□ -2.1
GPC3P51654 RNU4-40P-201ENST00000364351 143 ntBASIC1.95□□□□□ -2.1
GPC3P51654 RNA5SP190-201ENST00000365222 118 ntBASIC1.95□□□□□ -2.1
GPC3P51654 RNU6-1222P-201ENST00000384615 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms