Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RNU6-572P-201ENST00000516724 80 ntBASIC2.98□□□□□ -1.93
MMP13P45452 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.98□□□□□ -1.93
MMP13P45452 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.98□□□□□ -1.93
MMP13P45452 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
MMP13P45452 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.98□□□□□ -1.93
MMP13P45452 AP003122.5-201ENST00000527668 3766 ntBASIC2.98□□□□□ -1.93
MMP13P45452 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MMP13P45452 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.97□□□□□ -1.93
MMP13P45452 MTND5P9-201ENST00000503854 1755 ntBASIC2.97□□□□□ -1.93
MMP13P45452 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.97□□□□□ -1.93
MMP13P45452 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
MMP13P45452 Y_RNA.19-201ENST00000362462 99 ntBASIC2.97□□□□□ -1.93
MMP13P45452 Y_RNA.477-201ENST00000384352 108 ntBASIC2.97□□□□□ -1.93
MMP13P45452 RNU6-933P-201ENST00000384424 107 ntBASIC2.97□□□□□ -1.93
MMP13P45452 MIR325-201ENST00000385260 98 ntBASIC2.97□□□□□ -1.93
MMP13P45452 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
MMP13P45452 Y_RNA.592-201ENST00000410274 109 ntBASIC2.97□□□□□ -1.93
MMP13P45452 RNU6-847P-201ENST00000411115 108 ntBASIC2.97□□□□□ -1.93
MMP13P45452 AL031183.1-201ENST00000457667 207 ntBASIC2.97□□□□□ -1.93
MMP13P45452 LINC01399-202ENST00000458450 244 ntBASIC2.97□□□□□ -1.93
MMP13P45452 U8.22-201ENST00000459141 133 ntBASIC2.97□□□□□ -1.93
MMP13P45452 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.97□□□□□ -1.93
MMP13P45452 SCGB1D5P-201ENST00000515134 247 ntBASIC2.97□□□□□ -1.93
MMP13P45452 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.97□□□□□ -1.93
MMP13P45452 ATP5F1P5-201ENST00000526403 760 ntBASIC2.97□□□□□ -1.93
MMP13P45452 HSPE1P20-201ENST00000538133 289 ntBASIC2.97□□□□□ -1.93
MMP13P45452 AC022080.3-201ENST00000544433 482 ntBASIC2.97□□□□□ -1.93
MMP13P45452 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.97□□□□□ -1.93
MMP13P45452 AC008121.1-201ENST00000603244 268 ntBASIC2.97□□□□□ -1.93
MMP13P45452 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.97□□□□□ -1.93
MMP13P45452 AC004805.2-201ENST00000605382 482 ntBASIC2.97□□□□□ -1.93
MMP13P45452 MIR8076-201ENST00000611401 83 ntBASIC2.97□□□□□ -1.93
MMP13P45452 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.97□□□□□ -1.93
MMP13P45452 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.97□□□□□ -1.93
MMP13P45452 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
MMP13P45452 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
MMP13P45452 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
MMP13P45452 AC010680.1-201ENST00000590024 3590 ntBASIC2.96□□□□□ -1.94
MMP13P45452 Y_RNA.14-201ENST00000362415 103 ntBASIC2.96□□□□□ -1.94
MMP13P45452 Y_RNA.152-201ENST00000363578 100 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RNU6-770P-201ENST00000363929 105 ntBASIC2.96□□□□□ -1.94
MMP13P45452 Y_RNA.288-201ENST00000364854 92 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RNU6-336P-201ENST00000364891 107 ntBASIC2.96□□□□□ -1.94
MMP13P45452 CD24P4-201ENST00000382840 243 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RNU6-1027P-201ENST00000383998 107 ntBASIC2.96□□□□□ -1.94
MMP13P45452 Y_RNA.562-201ENST00000384695 113 ntBASIC2.96□□□□□ -1.94
MMP13P45452 MIR625-201ENST00000385047 85 ntBASIC2.96□□□□□ -1.94
MMP13P45452 MIR548I3-201ENST00000408378 149 ntBASIC2.96□□□□□ -1.94
MMP13P45452 MIR548I1-201ENST00000408810 149 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.96□□□□□ -1.94
MMP13P45452 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.96□□□□□ -1.94
MMP13P45452 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.96□□□□□ -1.94
MMP13P45452 EIF4EP2-201ENST00000422816 654 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AC007560.1-201ENST00000426912 237 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RPEP5-201ENST00000441137 268 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RPL37P4-201ENST00000448908 268 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.96□□□□□ -1.94
MMP13P45452 S100A11P2-201ENST00000467589 312 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AC103975.1-201ENST00000482506 483 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AC010469.2-201ENST00000496412 480 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RNU6-612P-201ENST00000516909 102 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RNU7-4P-201ENST00000516961 62 ntBASIC2.96□□□□□ -1.94
MMP13P45452 RNU6-570P-201ENST00000517051 105 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AC007375.1-201ENST00000554513 578 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AMZ2P1-203ENST00000565833 850 ntBASIC2.96□□□□□ -1.94
MMP13P45452 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.96□□□□□ -1.94
MMP13P45452 AC096772.1-201ENST00000609146 564 ntBASIC2.96□□□□□ -1.94
MMP13P45452 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.96□□□□□ -1.94
MMP13P45452 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
MMP13P45452 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
MMP13P45452 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
MMP13P45452 RNA5SP139-201ENST00000364340 117 ntBASIC2.95□□□□□ -1.94
MMP13P45452 Y_RNA.350-201ENST00000365409 98 ntBASIC2.95□□□□□ -1.94
MMP13P45452 Y_RNA.518-201ENST00000384552 113 ntBASIC2.95□□□□□ -1.94
MMP13P45452 RNU6-851P-201ENST00000384565 107 ntBASIC2.95□□□□□ -1.94
MMP13P45452 MIR215-201ENST00000384858 110 ntBASIC2.95□□□□□ -1.94
MMP13P45452 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.95□□□□□ -1.94
MMP13P45452 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.95□□□□□ -1.94
MMP13P45452 CYCSP32-201ENST00000440548 321 ntBASIC2.95□□□□□ -1.94
MMP13P45452 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MMP13P45452 AC010099.1-201ENST00000455434 375 ntBASIC2.95□□□□□ -1.94
MMP13P45452 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.95□□□□□ -1.94
MMP13P45452 AK3P2-201ENST00000507976 429 ntBASIC2.95□□□□□ -1.94
MMP13P45452 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.95□□□□□ -1.94
MMP13P45452 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
MMP13P45452 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
MMP13P45452 CYCSP39-201ENST00000565821 309 ntBASIC2.95□□□□□ -1.94
MMP13P45452 MIR3200-201ENST00000580767 85 ntBASIC2.95□□□□□ -1.94
MMP13P45452 AC010900.2-201ENST00000604508 210 ntBASIC2.95□□□□□ -1.94
MMP13P45452 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.95□□□□□ -1.94
MMP13P45452 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.95□□□□□ -1.94
MMP13P45452 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MMP13P45452 AC022336.2-201ENST00000568966 2538 ntBASIC2.94□□□□□ -1.94
MMP13P45452 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
MMP13P45452 AC096644.4-201ENST00000563417 2912 ntBASIC2.94□□□□□ -1.94
MMP13P45452 Y_RNA.471-201ENST00000384312 102 ntBASIC2.94□□□□□ -1.94
MMP13P45452 RNU6-713P-201ENST00000384761 107 ntBASIC2.94□□□□□ -1.94
MMP13P45452 MIR128-1-201ENST00000384921 82 ntBASIC2.94□□□□□ -1.94
MMP13P45452 RPS29P13-201ENST00000402041 169 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms