Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC233981.2-201ENST00000611524 1614 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 RNU6-266P-201ENST00000364225 107 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 RNU6-160P-201ENST00000384591 107 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
FDFT1P37268 SNORA12-201ENST00000391162 147 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.56□□□□□ -2.16
FDFT1P37268 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
FDFT1P37268 AL590135.1-201ENST00000422215 156 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC019205.3-201ENST00000424573 156 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC010975.2-201ENST00000427781 588 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.56□□□□□ -2.16
FDFT1P37268 AC244670.1-201ENST00000436879 112 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.56□□□□□ -2.16
FDFT1P37268 AC016700.2-201ENST00000446011 156 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.56□□□□□ -2.16
FDFT1P37268 SNRPFP3-201ENST00000457792 225 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 RNU6-333P-201ENST00000459117 107 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC015911.1-201ENST00000495111 156 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC079140.5-201ENST00000507882 310 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AK3P2-201ENST00000507976 429 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.56□□□□□ -2.16
FDFT1P37268 AC116337.1-201ENST00000509680 687 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC096745.1-201ENST00000509945 370 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.56□□□□□ -2.16
FDFT1P37268 AC105417.1-201ENST00000514691 285 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 Y_RNA.695-201ENST00000516715 107 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 SNORA25.17-201ENST00000517184 124 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC022880.1-201ENST00000534017 973 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 MIR3136-201ENST00000583498 78 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 AC121247.2-201ENST00000604776 136 ntBASIC1.56□□□□□ -2.16
FDFT1P37268 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
FDFT1P37268 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
FDFT1P37268 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
FDFT1P37268 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
FDFT1P37268 MTND5P10-201ENST00000603719 1809 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 RNU6-661P-201ENST00000362409 107 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 RNU6-1120P-201ENST00000362988 108 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 RNU6-1141P-201ENST00000364520 107 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.55□□□□□ -2.16
FDFT1P37268 MTATP6P18-201ENST00000417994 673 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 MTCO2P34-201ENST00000421994 607 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 USP9YP29-201ENST00000445112 563 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 AC013470.1-201ENST00000453438 462 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.55□□□□□ -2.16
FDFT1P37268 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.55□□□□□ -2.16
FDFT1P37268 Y_RNA.675-201ENST00000516389 149 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 RN7SKP219-201ENST00000516825 296 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 MTCO2P4-201ENST00000517968 247 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
FDFT1P37268 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.55□□□□□ -2.16
FDFT1P37268 HSPE1P4-201ENST00000550617 308 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 AC103996.1-201ENST00000555468 102 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 AGGF1P4-201ENST00000568249 801 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 MIR3124-201ENST00000582636 67 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 AC110760.3-201ENST00000598794 467 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 MIR7843-201ENST00000622274 79 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
FDFT1P37268 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
FDFT1P37268 AC245060.5-201ENST00000610778 3293 ntBASIC1.55□□□□□ -2.16
FDFT1P37268 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
FDFT1P37268 RNU6-23P-201ENST00000363283 107 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 SNORD32B-201ENST00000364460 84 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNU6-827P-201ENST00000365553 106 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
FDFT1P37268 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
FDFT1P37268 RNU6-338P-201ENST00000383888 105 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNU6-142P-201ENST00000384019 107 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNU6-348P-201ENST00000384386 107 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 AL357139.1-201ENST00000407792 426 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNA5SP100-201ENST00000410903 110 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNA5SP59-201ENST00000410922 110 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 AL117339.3-201ENST00000418733 162 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 AC007098.1-201ENST00000420122 367 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
FDFT1P37268 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.54□□□□□ -2.16
FDFT1P37268 HMGN2P23-201ENST00000456759 269 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 FAM206BP-201ENST00000510179 541 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 RNA5SP490-201ENST00000517141 136 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 COPS8P3-201ENST00000526024 482 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.54□□□□□ -2.16
FDFT1P37268 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.54□□□□□ -2.16
FDFT1P37268 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.54□□□□□ -2.16
FDFT1P37268 MIR4528-201ENST00000577763 90 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 MTATP6P3-201ENST00000581686 676 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
FDFT1P37268 AC136475.10-201ENST00000620253 385 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 AC130454.1-201ENST00000622948 401 ntBASIC1.54□□□□□ -2.16
FDFT1P37268 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
FDFT1P37268 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.54□□□□□ -2.16
FDFT1P37268 RNU6-552P-201ENST00000362869 119 ntBASIC1.53□□□□□ -2.16
FDFT1P37268 RNU4-56P-201ENST00000364700 142 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms