Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-213P-201ENST00000384051 104 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 RNU6-21P-201ENST00000384710 107 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 MIR491-201ENST00000384877 84 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HOXC12P31275 TRIAP1P1-201ENST00000427062 225 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 AL139109.1-201ENST00000455491 297 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 AC073901.1-201ENST00000462471 408 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC12P31275 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.51□□□□□ -1.85
HOXC12P31275 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC12P31275 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 AC009093.8-201ENST00000641769 292 ntBASIC3.51□□□□□ -1.85
HOXC12P31275 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC12P31275 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC12P31275 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC12P31275 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC12P31275 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC12P31275 BX322639.1-202ENST00000423987 2213 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC12P31275 RNU1-105P-201ENST00000363470 161 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 Y_RNA.179-201ENST00000363844 90 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 RNU6-290P-201ENST00000365212 101 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 RNU6-378P-201ENST00000384324 107 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 Y_RNA.539-201ENST00000384635 107 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 MIR34B-201ENST00000385076 84 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 MIR767-201ENST00000390228 109 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 SNORA3C-201ENST00000408792 125 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 SNORA57.3-201ENST00000411095 141 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC12P31275 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC12P31275 AC117440.1-201ENST00000474107 571 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 RPL36AP48-201ENST00000485521 314 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 Y_RNA.683-201ENST00000516508 93 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 IGKV2-38-201ENST00000517443 247 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 AC026403.1-201ENST00000518938 295 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 RRN3P3-201ENST00000549207 578 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC12P31275 AL360157.1-201ENST00000565962 87 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 MIR3200-201ENST00000580767 85 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 MZT1P2-201ENST00000604387 248 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 AL357075.2-201ENST00000614906 189 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.5□□□□□ -1.85
HOXC12P31275 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC12P31275 MTND5P35-201ENST00000557537 1720 ntBASIC3.5□□□□□ -1.85
HOXC12P31275 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC12P31275 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.49□□□□□ -1.85
HOXC12P31275 AC018555.1-201ENST00000567548 1980 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC12P31275 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC12P31275 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
HOXC12P31275 Y_RNA.286-201ENST00000364813 102 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 RNA5SP354-201ENST00000391247 136 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 MIR320B2-201ENST00000408479 138 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC12P31275 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC12P31275 snoU13.14-201ENST00000459372 104 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 AC110768.1-201ENST00000509222 400 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 SERF1AP1-201ENST00000514575 187 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 SNORA70.24-201ENST00000517233 118 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 AK6P2-201ENST00000549020 471 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.49□□□□□ -1.85
HOXC12P31275 AC005520.5-201ENST00000613926 164 ntBASIC3.49□□□□□ -1.85
HOXC12P31275 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC12P31275 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.49□□□□□ -1.85
HOXC12P31275 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC12P31275 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.49□□□□□ -1.85
HOXC12P31275 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC12P31275 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HOXC12P31275 AC073346.2-201ENST00000624724 2058 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC12P31275 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC12P31275 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC12P31275 RNU6-1266P-201ENST00000362794 105 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 RNU6-799P-201ENST00000363567 107 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 MIR186-201ENST00000384988 86 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 SNORA53-201ENST00000391141 249 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 AIMP1P2-201ENST00000425294 312 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 HMGN2P31-201ENST00000432430 273 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 MTND5P15-201ENST00000434246 349 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 RPS26P15-201ENST00000488067 348 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC12P31275 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.48□□□□□ -1.85
HOXC12P31275 RNA5SP179-201ENST00000517284 121 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 AL356575.1-201ENST00000603008 283 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 SNRPGP20-201ENST00000604477 205 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 BX284668.6-201ENST00000606899 438 ntBASIC3.48□□□□□ -1.85
HOXC12P31275 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC12P31275 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC12P31275 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.48□□□□□ -1.85
HOXC12P31275 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXC12P31275 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.47□□□□□ -1.85
HOXC12P31275 RNU6-1175P-201ENST00000365200 107 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 RNU6-245P-201ENST00000384020 107 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 RNU6-793P-201ENST00000384233 104 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AL512633.1-201ENST00000399931 655 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC12P31275 AC083863.1-201ENST00000438811 231 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 UQCRBP2-201ENST00000447827 297 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AC103975.1-201ENST00000482506 483 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms