Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 Y_RNA.306-201ENST00000365015 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 SNORA72.2-201ENST00000365028 127 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.312-201ENST00000365089 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.322-201ENST00000365151 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 RNU6-651P-201ENST00000411040 105 ntBASIC4.43□□□□□ -1.7
RFX1P22670 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFX1P22670 RAB28P5-201ENST00000427490 651 ntBASIC4.43□□□□□ -1.7
RFX1P22670 MRPS10P1-201ENST00000448483 130 ntBASIC4.43□□□□□ -1.7
RFX1P22670 AL133547.1-201ENST00000448546 220 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.650-201ENST00000459002 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 AC091179.1-201ENST00000461606 579 ntBASIC4.43□□□□□ -1.7
RFX1P22670 RPL36AP48-201ENST00000485521 314 ntBASIC4.43□□□□□ -1.7
RFX1P22670 RNU6-344P-201ENST00000516635 111 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.777-201ENST00000516982 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.771-201ENST00000598668 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 TCL6_2.1-201ENST00000615162 119 ntBASIC4.43□□□□□ -1.7
RFX1P22670 MIR4727-201ENST00000622232 55 ntBASIC4.43□□□□□ -1.7
RFX1P22670 Y_RNA.789-201ENST00000622480 102 ntBASIC4.43□□□□□ -1.7
RFX1P22670 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX1P22670 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RFX1P22670 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
RFX1P22670 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RFX1P22670 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RFX1P22670 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RFX1P22670 MAPK10-322ENST00000641485 4530 ntBASIC4.42□□□□□ -1.7
RFX1P22670 MIR548M-201ENST00000408260 86 ntBASIC4.42□□□□□ -1.7
RFX1P22670 RNU2-61P-201ENST00000411069 191 ntBASIC4.42□□□□□ -1.7
RFX1P22670 RNA5SP306-201ENST00000411087 107 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AC004552.1-201ENST00000419089 348 ntBASIC4.42□□□□□ -1.7
RFX1P22670 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX1P22670 AC006011.1-201ENST00000442758 349 ntBASIC4.42□□□□□ -1.7
RFX1P22670 RPS26P3-201ENST00000470205 348 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AC090543.2-201ENST00000483963 348 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AC004057.1-201ENST00000485827 348 ntBASIC4.42□□□□□ -1.7
RFX1P22670 SNORD116-28-201ENST00000516123 91 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX1P22670 AL137100.2-201ENST00000555786 315 ntBASIC4.42□□□□□ -1.7
RFX1P22670 RPL21P9-201ENST00000556149 474 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.42□□□□□ -1.7
RFX1P22670 RN7SL703P-201ENST00000578485 302 ntBASIC4.42□□□□□ -1.7
RFX1P22670 MIR5684-201ENST00000585074 65 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AC012314.7-201ENST00000619693 93 ntBASIC4.42□□□□□ -1.7
RFX1P22670 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX1P22670 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
RFX1P22670 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
RFX1P22670 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RFX1P22670 MAPK10-372ENST00000641954 3413 ntBASIC4.42□□□□□ -1.7
RFX1P22670 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.41□□□□□ -1.7
RFX1P22670 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX1P22670 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.41□□□□□ -1.7
RFX1P22670 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFX1P22670 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX1P22670 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
RFX1P22670 Y_RNA.590-201ENST00000410140 107 ntBASIC4.41□□□□□ -1.7
RFX1P22670 AL445584.1-201ENST00000431451 330 ntBASIC4.41□□□□□ -1.7
RFX1P22670 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.41□□□□□ -1.7
RFX1P22670 RNU7-120P-201ENST00000459334 63 ntBASIC4.41□□□□□ -1.7
RFX1P22670 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.41□□□□□ -1.7
RFX1P22670 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.41□□□□□ -1.7
RFX1P22670 Y_RNA.679-201ENST00000516416 91 ntBASIC4.41□□□□□ -1.7
RFX1P22670 AC024405.2-202ENST00000532731 184 ntBASIC4.41□□□□□ -1.7
RFX1P22670 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.41□□□□□ -1.7
RFX1P22670 RN7SL600P-201ENST00000581811 299 ntBASIC4.41□□□□□ -1.7
RFX1P22670 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.41□□□□□ -1.7
RFX1P22670 AC004467.1-201ENST00000615678 330 ntBASIC4.41□□□□□ -1.7
RFX1P22670 AL773545.4-201ENST00000637262 310 ntBASIC4.41□□□□□ -1.7
RFX1P22670 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
RFX1P22670 AL513478.4-201ENST00000641636 310 ntBASIC4.41□□□□□ -1.7
RFX1P22670 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RFX1P22670 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RFX1P22670 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RFX1P22670 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.4□□□□□ -1.7
RFX1P22670 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
RFX1P22670 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 Y_RNA.101-201ENST00000363154 102 ntBASIC4.4□□□□□ -1.71
RFX1P22670 MIR767-201ENST00000390228 109 ntBASIC4.4□□□□□ -1.71
RFX1P22670 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
RFX1P22670 PCNPP3-201ENST00000393579 471 ntBASIC4.4□□□□□ -1.71
RFX1P22670 SNORA11.2-201ENST00000408318 127 ntBASIC4.4□□□□□ -1.71
RFX1P22670 MIR1251-201ENST00000408552 70 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX1P22670 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX1P22670 AC112771.1-201ENST00000463581 102 ntBASIC4.4□□□□□ -1.71
RFX1P22670 RPS26P15-201ENST00000488067 348 ntBASIC4.4□□□□□ -1.71
RFX1P22670 RPL7P47-201ENST00000497299 556 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AC026784.1-201ENST00000507986 352 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AC107393.1-201ENST00000512403 346 ntBASIC4.4□□□□□ -1.71
RFX1P22670 SCARNA13-201ENST00000516672 275 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AP002392.1-201ENST00000537692 208 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX1P22670 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 Z83818.1-201ENST00000603584 150 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AL161756.2-201ENST00000604597 246 ntBASIC4.4□□□□□ -1.71
RFX1P22670 RPL17P51-201ENST00000605218 238 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AC011921.3-201ENST00000605540 361 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AC005562.2-201ENST00000618264 111 ntBASIC4.4□□□□□ -1.71
RFX1P22670 AC091953.5-201ENST00000622919 233 ntBASIC4.4□□□□□ -1.71
RFX1P22670 MAPK10-373ENST00000641983 6772 ntBASIC4.4□□□□□ -1.71
RFX1P22670 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.4□□□□□ -1.71
RFX1P22670 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms