Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SNORD27.1-201ENST00000516319 72 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-1178P-201ENST00000516674 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNA5SP490-201ENST00000517141 136 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CTLA4P16410 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.06□□□□□ -2.24
CTLA4P16410 AC009094.1-201ENST00000564443 426 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.06□□□□□ -2.24
CTLA4P16410 MIR548AB-201ENST00000584917 84 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AC023043.2-201ENST00000589678 1026 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 VN1R80P-201ENST00000597126 338 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AC073413.2-201ENST00000604332 360 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 RNU6-6P-201ENST00000606623 107 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CTLA4P16410 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.06□□□□□ -2.24
CTLA4P16410 SNORD98-201ENST00000636377 67 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 AC091812.1-201ENST00000432235 1948 ntBASIC1.06□□□□□ -2.24
CTLA4P16410 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CTLA4P16410 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CTLA4P16410 RNU6-1097P-201ENST00000363586 107 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 RNU6-43P-201ENST00000384302 107 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 Y_RNA.560-201ENST00000384689 102 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 SNORA12-201ENST00000391162 147 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 MTCYBP2-201ENST00000407745 171 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 HIGD1AP15-201ENST00000416198 280 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 MTND3P17-201ENST00000416968 344 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AC123900.1-201ENST00000420390 96 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AC010099.3-201ENST00000423896 409 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AL596276.1-201ENST00000434465 418 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.05□□□□□ -2.24
CTLA4P16410 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.05□□□□□ -2.24
CTLA4P16410 MTND2P4-201ENST00000445034 1004 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 FTH1P25-201ENST00000447665 469 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 ART2BP-201ENST00000453501 499 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 RNU7-182P-201ENST00000459009 62 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AC087477.1-201ENST00000465747 340 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.05□□□□□ -2.24
CTLA4P16410 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.05□□□□□ -2.24
CTLA4P16410 RPL36AP21-201ENST00000490372 323 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 LRRC34P2-201ENST00000514850 553 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 MIR449C-201ENST00000516047 92 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.05□□□□□ -2.24
CTLA4P16410 AL590229.1-201ENST00000603497 542 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AL356157.2-201ENST00000605122 111 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 Z99289.3-201ENST00000605586 594 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 uc_338.11-201ENST00000619132 160 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AL353770.2-201ENST00000620024 78 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 AC079248.2-201ENST00000623779 326 ntBASIC1.05□□□□□ -2.24
CTLA4P16410 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CTLA4P16410 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CTLA4P16410 MIR378A-201ENST00000362177 66 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 MIR26B-201ENST00000362251 77 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 U3.4-201ENST00000363352 213 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 RNU6-336P-201ENST00000364891 107 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 SNORA72.3-201ENST00000365074 132 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 RPS29P13-201ENST00000402041 169 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 RNU4-46P-201ENST00000410818 138 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC078809.1-201ENST00000427601 140 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC010975.2-201ENST00000427781 588 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.04□□□□□ -2.24
CTLA4P16410 AC244670.1-201ENST00000436879 112 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 GAPDHP17-201ENST00000449858 1001 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC130509.1-201ENST00000464158 433 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CTLA4P16410 MTCO3P7-201ENST00000510008 774 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 RN7SKP179-201ENST00000516126 217 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.04□□□□□ -2.24
CTLA4P16410 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
CTLA4P16410 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.04□□□□□ -2.24
CTLA4P16410 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.04□□□□□ -2.24
CTLA4P16410 AP000942.3-201ENST00000603702 160 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AL050343.2-201ENST00000607338 280 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC008250.2-201ENST00000615261 205 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AP001506.1-201ENST00000615444 211 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AL157834.3-201ENST00000615543 103 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
CTLA4P16410 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC022513.1-201ENST00000624512 117 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 SEPT14P19-203ENST00000633205 211 ntBASIC1.04□□□□□ -2.24
CTLA4P16410 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.03□□□□□ -2.24
CTLA4P16410 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CTLA4P16410 RNU6-271P-201ENST00000363858 105 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 RNU6-553P-201ENST00000364047 96 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 RNU6-1303P-201ENST00000364841 107 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CTLA4P16410 Y_RNA.480-201ENST00000384364 102 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 RNU6-692P-201ENST00000384496 107 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 RN7SKP61-201ENST00000410642 295 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 HMGN1P14-201ENST00000412459 517 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AC013410.2-201ENST00000422627 201 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.03□□□□□ -2.24
CTLA4P16410 ISCA1P6-201ENST00000427740 390 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CTLA4P16410 AL033528.1-201ENST00000453780 140 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AL162395.1-201ENST00000457882 422 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.03□□□□□ -2.24
CTLA4P16410 AC079140.5-201ENST00000507882 310 ntBASIC1.03□□□□□ -2.24
CTLA4P16410 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.03□□□□□ -2.24
CTLA4P16410 RNU6-232P-201ENST00000517144 64 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms