Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL6A2P12110 SNORA70.4-201ENST00000365509 134 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 SNORA36A-201ENST00000384221 132 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 RNU6-1145P-201ENST00000384246 107 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 Y_RNA.477-201ENST00000384352 108 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 RN7SKP156-201ENST00000410308 342 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 AC012306.1-201ENST00000423267 114 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 PTGES3P4-201ENST00000426243 356 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 WARS2P1-201ENST00000429678 537 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.49□□□□□ -1.85
COL6A2P12110 RPL23AP67-201ENST00000465341 474 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 SNRPGP7-201ENST00000469016 106 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 SNORD59.2-201ENST00000516873 68 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 RNU1-45P-201ENST00000517191 141 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 AP000867.2-201ENST00000532468 320 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.49□□□□□ -1.85
COL6A2P12110 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL6A2P12110 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.49□□□□□ -1.85
COL6A2P12110 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL6A2P12110 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL6A2P12110 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.49□□□□□ -1.85
COL6A2P12110 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
COL6A2P12110 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL6A2P12110 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL6A2P12110 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
COL6A2P12110 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
COL6A2P12110 Y_RNA.352-201ENST00000365439 102 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RNU6-19P-201ENST00000384718 107 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 MIR200C-201ENST00000384980 68 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RNA5SP38-201ENST00000410750 119 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 AP000705.1-201ENST00000454567 350 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RPS4XP2-201ENST00000458402 793 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RN7SL542P-201ENST00000467147 294 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RN7SL442P-201ENST00000473804 320 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RPL30P12-201ENST00000474666 353 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.48□□□□□ -1.85
COL6A2P12110 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.48□□□□□ -1.85
COL6A2P12110 RNU6-496P-201ENST00000516145 99 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RNU6-1338P-201ENST00000516328 91 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 RNU6-567P-201ENST00000516746 107 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.48□□□□□ -1.85
COL6A2P12110 AC008739.3-201ENST00000603262 127 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 AL078605.1-201ENST00000603529 500 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 AC011476.5-201ENST00000615594 130 ntBASIC3.48□□□□□ -1.85
COL6A2P12110 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
COL6A2P12110 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
COL6A2P12110 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.48□□□□□ -1.85
COL6A2P12110 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL6A2P12110 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
COL6A2P12110 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL6A2P12110 RNU6-937P-201ENST00000384325 106 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 MIR329-1-201ENST00000385028 80 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 PTMAP2-201ENST00000397627 327 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 SNORA11.1-201ENST00000408133 129 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 SNORD12B-201ENST00000410433 91 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 CYCSP19-201ENST00000411715 316 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 AC017079.2-201ENST00000416102 485 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 AC096649.2-201ENST00000416186 393 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.47□□□□□ -1.85
COL6A2P12110 GOT2P5-201ENST00000433995 546 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 AL358232.1-201ENST00000448030 501 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.47□□□□□ -1.85
COL6A2P12110 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.47□□□□□ -1.85
COL6A2P12110 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.47□□□□□ -1.85
COL6A2P12110 RPS27P29-201ENST00000463110 252 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 RNU6-111P-201ENST00000517179 105 ntBASIC3.47□□□□□ -1.85
COL6A2P12110 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.47□□□□□ -1.85
COL6A2P12110 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL6A2P12110 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
COL6A2P12110 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.46□□□□□ -1.85
COL6A2P12110 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL6A2P12110 RNA5SP361-201ENST00000362686 118 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 SNORD113-8-201ENST00000363497 74 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 RNU6-280P-201ENST00000364145 104 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
COL6A2P12110 Y_RNA.539-201ENST00000384635 107 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 Y_RNA.541-201ENST00000384640 113 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AC093578.1-201ENST00000415219 368 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AL590135.1-201ENST00000422215 156 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.46□□□□□ -1.86
COL6A2P12110 AC007215.1-201ENST00000464893 276 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AC107626.1-201ENST00000471084 183 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 RPL26P26-201ENST00000480251 434 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AC092185.1-201ENST00000491371 97 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 HMGB1P35-201ENST00000503360 598 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 DEFB108E-201ENST00000524692 240 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AK6P2-201ENST00000549020 471 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.46□□□□□ -1.86
COL6A2P12110 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.46□□□□□ -1.86
COL6A2P12110 MIR5685-201ENST00000579080 79 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 MIR4423-201ENST00000580922 80 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 MIR3944-201ENST00000581277 108 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 MIR3136-201ENST00000583498 78 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 AL133393.1-201ENST00000603277 287 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 MIR6075-201ENST00000620782 95 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms