Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNU6-581P-201ENST00000516214 105 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AC021739.1-201ENST00000559631 174 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 KLKP1-201ENST00000595979 403 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AC110491.1-201ENST00000562191 2010 ntBASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CSB-PGBD3P0DP91 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.488-201ENST00000384403 102 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 AC017083.1-201ENST00000428093 483 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 AC005300.1-201ENST00000428401 373 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 RNU5F-8P-201ENST00000515941 111 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 RNU2-27P-201ENST00000516185 142 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 AC090877.1-201ENST00000561418 344 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 HMGN2P15-201ENST00000585707 270 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 AC005828.6-201ENST00000606610 232 ntBASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CSB-PGBD3P0DP91 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 AC100821.1-201ENST00000523153 2479 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 RNU4-35P-201ENST00000362588 141 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-626P-201ENST00000363354 107 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-818P-201ENST00000364837 108 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-215P-201ENST00000365169 102 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.400-201ENST00000383963 111 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.570-201ENST00000384750 101 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 MIR32-201ENST00000384965 70 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 RNU1-139P-201ENST00000391307 165 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 AC074117.2-201ENST00000417130 397 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 RNA5SP272-201ENST00000516095 111 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 AC019159.1-201ENST00000605094 187 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 SCARNA15.3-201ENST00000626315 122 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 SCARNA4.1-201ENST00000628597 123 ntBASIC4.85□□□□□ -1.63
CSB-PGBD3P0DP91 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 AC002546.1-201ENST00000588041 2504 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.136-201ENST00000363444 102 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-968P-201ENST00000384076 107 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 Y_RNA.597-201ENST00000410463 100 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 AL160275.2-201ENST00000412010 394 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 DBIP2-201ENST00000419076 262 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 IFNA11P-201ENST00000446352 526 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 AC007395.1-201ENST00000451333 677 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 RBMY2UP-201ENST00000453474 324 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 RNU6-567P-201ENST00000516746 107 ntBASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CSB-PGBD3P0DP91 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.84□□□□□ -1.64
CSB-PGBD3P0DP91 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-961P-201ENST00000363893 105 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RNU1-140P-201ENST00000365040 165 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-449P-201ENST00000383914 107 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-44P-201ENST00000384045 107 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-20P-201ENST00000384106 107 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 UBA52P6-201ENST00000399822 382 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 EIF1AXP1-201ENST00000419267 435 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC024067.1-201ENST00000426199 223 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC117440.1-201ENST00000474107 571 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AF186996.7-201ENST00000492781 209 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-426P-201ENST00000516464 97 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC006199.1-201ENST00000548728 219 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 RMST_6.1-201ENST00000611980 203 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 MIR3199-2-201ENST00000636243 86 ntBASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CSB-PGBD3P0DP91 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 Y_RNA.215-201ENST00000364204 112 ntBASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 AL353705.4-201ENST00000449661 238 ntBASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 AC097462.2-201ENST00000504623 481 ntBASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 BTF3L4P4-201ENST00000506381 449 ntBASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 RNU6-1114P-201ENST00000516022 107 ntBASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.82□□□□□ -1.64
CSB-PGBD3P0DP91 AC009163.5-201ENST00000575421 637 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms