Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNRPGP7-201ENST00000469016 106 ntBASIC0.96□□□□□ -2.26
TPM1P09493 RPS26P45-201ENST00000471748 340 ntBASIC0.96□□□□□ -2.26
TPM1P09493 AC108210.2-201ENST00000503681 201 ntBASIC0.96□□□□□ -2.26
TPM1P09493 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.96□□□□□ -2.26
TPM1P09493 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.96□□□□□ -2.26
TPM1P09493 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.96□□□□□ -2.26
TPM1P09493 MIR3923-201ENST00000579521 83 ntBASIC0.96□□□□□ -2.26
TPM1P09493 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.96□□□□□ -2.26
TPM1P09493 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TPM1P09493 AC006927.4-201ENST00000639187 543 ntBASIC0.96□□□□□ -2.26
TPM1P09493 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TPM1P09493 RNU6-61P-201ENST00000365528 109 ntBASIC0.95□□□□□ -2.26
TPM1P09493 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
TPM1P09493 MIR558-201ENST00000384920 94 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AL356776.1-201ENST00000406574 447 ntBASIC0.95□□□□□ -2.26
TPM1P09493 RN7SKP61-201ENST00000410642 295 ntBASIC0.95□□□□□ -2.26
TPM1P09493 RNU6-293P-201ENST00000411259 106 ntBASIC0.95□□□□□ -2.26
TPM1P09493 CYCSP33-201ENST00000414485 327 ntBASIC0.95□□□□□ -2.26
TPM1P09493 HIGD1AP15-201ENST00000416198 280 ntBASIC0.95□□□□□ -2.26
TPM1P09493 RPS27AP14-201ENST00000422868 454 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.95□□□□□ -2.26
TPM1P09493 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.95□□□□□ -2.26
TPM1P09493 AC119618.1-201ENST00000434191 222 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AC073910.1-201ENST00000445047 438 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AC112204.1-201ENST00000502591 103 ntBASIC0.95□□□□□ -2.26
TPM1P09493 RNU6-1041P-201ENST00000516254 102 ntBASIC0.95□□□□□ -2.26
TPM1P09493 RNU5F-4P-201ENST00000516581 114 ntBASIC0.95□□□□□ -2.26
TPM1P09493 ZNF321P-202ENST00000550843 495 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AL442163.3-201ENST00000554110 156 ntBASIC0.95□□□□□ -2.26
TPM1P09493 MIR4709-201ENST00000577272 72 ntBASIC0.95□□□□□ -2.26
TPM1P09493 SNORA59B-202ENST00000578183 701 ntBASIC0.95□□□□□ -2.26
TPM1P09493 BNIP3P16-201ENST00000589779 534 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AC107308.1-201ENST00000615897 301 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AL353997.5-201ENST00000618886 171 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AL359740.1-201ENST00000624340 592 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AC004808.1-201ENST00000627671 721 ntBASIC0.95□□□□□ -2.26
TPM1P09493 AC068647.2-201ENST00000637380 353 ntBASIC0.95□□□□□ -2.26
TPM1P09493 MIR378A-201ENST00000362177 66 ntBASIC0.94□□□□□ -2.26
TPM1P09493 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
TPM1P09493 RNU6-641P-201ENST00000384006 107 ntBASIC0.94□□□□□ -2.26
TPM1P09493 MTCYBP36-201ENST00000404146 440 ntBASIC0.94□□□□□ -2.26
TPM1P09493 MTCO2P21-201ENST00000419780 677 ntBASIC0.94□□□□□ -2.26
TPM1P09493 AC078809.1-201ENST00000427601 140 ntBASIC0.94□□□□□ -2.26
TPM1P09493 MTND1P20-201ENST00000430341 950 ntBASIC0.94□□□□□ -2.26
TPM1P09493 AC010587.1-201ENST00000505809 469 ntBASIC0.94□□□□□ -2.26
TPM1P09493 RNU6-377P-201ENST00000515965 102 ntBASIC0.94□□□□□ -2.26
TPM1P09493 RNU6-685P-201ENST00000517088 95 ntBASIC0.94□□□□□ -2.26
TPM1P09493 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.94□□□□□ -2.26
TPM1P09493 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.94□□□□□ -2.26
TPM1P09493 AC021231.3-201ENST00000558497 370 ntBASIC0.94□□□□□ -2.26
TPM1P09493 AL021879.1-201ENST00000611756 288 ntBASIC0.94□□□□□ -2.26
TPM1P09493 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
TPM1P09493 PCGEM1.1-201ENST00000613431 131 ntBASIC0.94□□□□□ -2.26
TPM1P09493 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.94□□□□□ -2.26
TPM1P09493 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
TPM1P09493 RNU6-157P-201ENST00000383957 107 ntBASIC0.93□□□□□ -2.26
TPM1P09493 RNU6-692P-201ENST00000384496 107 ntBASIC0.93□□□□□ -2.26
TPM1P09493 RNU6-636P-201ENST00000384598 107 ntBASIC0.93□□□□□ -2.26
TPM1P09493 MIR222-201ENST00000384992 110 ntBASIC0.93□□□□□ -2.26
TPM1P09493 MIR764-201ENST00000390811 85 ntBASIC0.93□□□□□ -2.26
TPM1P09493 RNU6-387P-201ENST00000411331 105 ntBASIC0.93□□□□□ -2.26
TPM1P09493 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.93□□□□□ -2.26
TPM1P09493 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.93□□□□□ -2.26
TPM1P09493 USP9YP14-201ENST00000430663 563 ntBASIC0.93□□□□□ -2.26
TPM1P09493 USP9YP25-201ENST00000457708 443 ntBASIC0.93□□□□□ -2.26
TPM1P09493 AC007547.1-201ENST00000462177 490 ntBASIC0.93□□□□□ -2.26
TPM1P09493 AC103851.1-201ENST00000506833 274 ntBASIC0.93□□□□□ -2.26
TPM1P09493 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
TPM1P09493 SCARNA16.2-201ENST00000516520 172 ntBASIC0.93□□□□□ -2.26
TPM1P09493 RNU6-856P-201ENST00000516959 98 ntBASIC0.93□□□□□ -2.26
TPM1P09493 MTND4LP18-201ENST00000526864 291 ntBASIC0.93□□□□□ -2.26
TPM1P09493 RPL17P51-201ENST00000605218 238 ntBASIC0.93□□□□□ -2.26
TPM1P09493 AL353149.1-201ENST00000610667 244 ntBASIC0.93□□□□□ -2.26
TPM1P09493 AC008147.4-201ENST00000617570 1204 ntBASIC0.93□□□□□ -2.26
TPM1P09493 SNORA4.2-201ENST00000365313 147 ntBASIC0.92□□□□□ -2.26
TPM1P09493 RNA5SP259-201ENST00000365541 109 ntBASIC0.92□□□□□ -2.26
TPM1P09493 RNU6-1026P-201ENST00000384465 108 ntBASIC0.92□□□□□ -2.26
TPM1P09493 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
TPM1P09493 RNU6-1242P-201ENST00000391052 103 ntBASIC0.92□□□□□ -2.26
TPM1P09493 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.92□□□□□ -2.26
TPM1P09493 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.92□□□□□ -2.26
TPM1P09493 snoU13.23-201ENST00000458863 104 ntBASIC0.92□□□□□ -2.26
TPM1P09493 AC074344.1-201ENST00000512823 224 ntBASIC0.92□□□□□ -2.26
TPM1P09493 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.92□□□□□ -2.26
TPM1P09493 CTHRC1P1-201ENST00000605383 469 ntBASIC0.92□□□□□ -2.26
TPM1P09493 AC136475.10-201ENST00000620253 385 ntBASIC0.92□□□□□ -2.26
TPM1P09493 AC019226.2-201ENST00000625973 424 ntBASIC0.92□□□□□ -2.26
TPM1P09493 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
TPM1P09493 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
TPM1P09493 RNU6-1123P-201ENST00000362347 106 ntBASIC0.91□□□□□ -2.26
TPM1P09493 RNU1-76P-201ENST00000362903 159 ntBASIC0.91□□□□□ -2.26
TPM1P09493 U3.4-201ENST00000363352 213 ntBASIC0.91□□□□□ -2.26
TPM1P09493 MIR19B1-201ENST00000384829 87 ntBASIC0.91□□□□□ -2.26
TPM1P09493 MIR515-2-201ENST00000384883 83 ntBASIC0.91□□□□□ -2.26
TPM1P09493 MIR515-1-201ENST00000384884 83 ntBASIC0.91□□□□□ -2.26
TPM1P09493 SNORA26.3-201ENST00000391119 136 ntBASIC0.91□□□□□ -2.26
TPM1P09493 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.91□□□□□ -2.26
TPM1P09493 AC007283.2-201ENST00000424739 197 ntBASIC0.91□□□□□ -2.26
TPM1P09493 MTND1P18-201ENST00000448191 573 ntBASIC0.91□□□□□ -2.26
TPM1P09493 AL031313.1-201ENST00000448435 256 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms