Protein–RNA interactions for Protein: P08138

NGFR, Tumor necrosis factor receptor superfamily member 16, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFRP08138 SNORA48.5-201ENST00000391143 135 ntBASIC2.68□□□□□ -1.98
NGFRP08138 RNU2-38P-201ENST00000410856 79 ntBASIC2.68□□□□□ -1.98
NGFRP08138 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.68□□□□□ -1.98
NGFRP08138 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.68□□□□□ -1.98
NGFRP08138 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.68□□□□□ -1.98
NGFRP08138 AL512844.2-201ENST00000433990 593 ntBASIC2.68□□□□□ -1.98
NGFRP08138 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.68□□□□□ -1.98
NGFRP08138 AC098831.1-201ENST00000440661 216 ntBASIC2.68□□□□□ -1.98
NGFRP08138 RPEP5-201ENST00000441137 268 ntBASIC2.68□□□□□ -1.98
NGFRP08138 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.68□□□□□ -1.98
NGFRP08138 RNU6-1132P-201ENST00000459214 107 ntBASIC2.68□□□□□ -1.98
NGFRP08138 S100A11P2-201ENST00000467589 312 ntBASIC2.68□□□□□ -1.98
NGFRP08138 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.68□□□□□ -1.98
NGFRP08138 RPL30P5-201ENST00000494923 336 ntBASIC2.68□□□□□ -1.98
NGFRP08138 RNU6-1143P-201ENST00000516125 104 ntBASIC2.68□□□□□ -1.98
NGFRP08138 RNA5SP341-201ENST00000516261 117 ntBASIC2.68□□□□□ -1.98
NGFRP08138 SNORA31.18-201ENST00000517043 134 ntBASIC2.68□□□□□ -1.98
NGFRP08138 AC034114.1-201ENST00000520293 285 ntBASIC2.68□□□□□ -1.98
NGFRP08138 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.68□□□□□ -1.98
NGFRP08138 AL590705.4-201ENST00000532209 134 ntBASIC2.68□□□□□ -1.98
NGFRP08138 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.68□□□□□ -1.98
NGFRP08138 AC078938.1-201ENST00000620993 318 ntBASIC2.68□□□□□ -1.98
NGFRP08138 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.68□□□□□ -1.98
NGFRP08138 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NGFRP08138 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.68□□□□□ -1.98
NGFRP08138 AC010615.1-201ENST00000594254 1764 ntBASIC2.68□□□□□ -1.98
NGFRP08138 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.68□□□□□ -1.98
NGFRP08138 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
NGFRP08138 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
NGFRP08138 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NGFRP08138 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
NGFRP08138 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NGFRP08138 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.67□□□□□ -1.98
NGFRP08138 AL353743.1-202ENST00000431724 1695 ntBASIC2.67□□□□□ -1.98
NGFRP08138 RNU6-799P-201ENST00000363567 107 ntBASIC2.67□□□□□ -1.98
NGFRP08138 Y_RNA.257-201ENST00000364596 102 ntBASIC2.67□□□□□ -1.98
NGFRP08138 Y_RNA.405-201ENST00000383979 100 ntBASIC2.67□□□□□ -1.98
NGFRP08138 Y_RNA.451-201ENST00000384200 100 ntBASIC2.67□□□□□ -1.98
NGFRP08138 Y_RNA.524-201ENST00000384564 100 ntBASIC2.67□□□□□ -1.98
NGFRP08138 Y_RNA.526-201ENST00000384572 110 ntBASIC2.67□□□□□ -1.98
NGFRP08138 Y_RNA.561-201ENST00000384694 100 ntBASIC2.67□□□□□ -1.98
NGFRP08138 SNORA12.2-201ENST00000391040 156 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AC244505.4-201ENST00000434905 287 ntBASIC2.67□□□□□ -1.98
NGFRP08138 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.67□□□□□ -1.98
NGFRP08138 Z98949.2-201ENST00000440996 144 ntBASIC2.67□□□□□ -1.98
NGFRP08138 SSXP5-201ENST00000443473 287 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.67□□□□□ -1.98
NGFRP08138 LINC01399-202ENST00000458450 244 ntBASIC2.67□□□□□ -1.98
NGFRP08138 RNA5SP385-201ENST00000515947 110 ntBASIC2.67□□□□□ -1.98
NGFRP08138 RNU1-103P-201ENST00000516502 125 ntBASIC2.67□□□□□ -1.98
NGFRP08138 SNORA43.2-201ENST00000516652 128 ntBASIC2.67□□□□□ -1.98
NGFRP08138 SNORA70.24-201ENST00000517233 118 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.67□□□□□ -1.98
NGFRP08138 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
NGFRP08138 MIR4782-201ENST00000577987 79 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AC060766.3-201ENST00000591442 263 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AL390123.1-201ENST00000603216 237 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AC093732.2-201ENST00000607950 274 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AC090115.4-201ENST00000609970 188 ntBASIC2.67□□□□□ -1.98
NGFRP08138 AC027309.3-201ENST00000623419 351 ntBASIC2.67□□□□□ -1.98
NGFRP08138 SCARNA4-202ENST00000625402 129 ntBASIC2.67□□□□□ -1.98
NGFRP08138 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
NGFRP08138 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NGFRP08138 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.66□□□□□ -1.98
NGFRP08138 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NGFRP08138 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.66□□□□□ -1.98
NGFRP08138 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NGFRP08138 RNU6-898P-201ENST00000365627 104 ntBASIC2.66□□□□□ -1.98
NGFRP08138 CD24P4-201ENST00000382840 243 ntBASIC2.66□□□□□ -1.98
NGFRP08138 SNORA9-201ENST00000384215 133 ntBASIC2.66□□□□□ -1.98
NGFRP08138 RNU6-611P-201ENST00000384276 104 ntBASIC2.66□□□□□ -1.98
NGFRP08138 Y_RNA.471-201ENST00000384312 102 ntBASIC2.66□□□□□ -1.98
NGFRP08138 Y_RNA.518-201ENST00000384552 113 ntBASIC2.66□□□□□ -1.98
NGFRP08138 MIR628-201ENST00000385229 95 ntBASIC2.66□□□□□ -1.98
NGFRP08138 MIR181B1-201ENST00000385240 110 ntBASIC2.66□□□□□ -1.98
NGFRP08138 MIR190B-201ENST00000401119 79 ntBASIC2.66□□□□□ -1.98
NGFRP08138 MIR1302-6-201ENST00000408466 90 ntBASIC2.66□□□□□ -1.98
NGFRP08138 U3.37-201ENST00000408528 213 ntBASIC2.66□□□□□ -1.98
NGFRP08138 RN7SKP123-201ENST00000410732 291 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AP000275.1-201ENST00000411943 390 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AC009310.1-201ENST00000414414 451 ntBASIC2.66□□□□□ -1.98
NGFRP08138 MTCO3P19-201ENST00000415864 321 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.66□□□□□ -1.98
NGFRP08138 RPL21P38-201ENST00000418090 167 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.66□□□□□ -1.98
NGFRP08138 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.66□□□□□ -1.98
NGFRP08138 Z82188.1-201ENST00000436709 154 ntBASIC2.66□□□□□ -1.98
NGFRP08138 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.66□□□□□ -1.98
NGFRP08138 U8.22-201ENST00000459141 133 ntBASIC2.66□□□□□ -1.98
NGFRP08138 RN7SKP210-201ENST00000459176 261 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AC010469.2-201ENST00000496412 480 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.66□□□□□ -1.98
NGFRP08138 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.66□□□□□ -1.98
NGFRP08138 AC006445.2-201ENST00000510061 472 ntBASIC2.66□□□□□ -1.98
NGFRP08138 AC025465.3-201ENST00000510570 311 ntBASIC2.66□□□□□ -1.98
NGFRP08138 SCARNA13-201ENST00000516672 275 ntBASIC2.66□□□□□ -1.98
NGFRP08138 RNU6-1282P-201ENST00000516735 96 ntBASIC2.66□□□□□ -1.98
NGFRP08138 RN7SKP282-201ENST00000516824 299 ntBASIC2.66□□□□□ -1.98
NGFRP08138 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms