Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AP002884.2-201ENST00000471647 395 ntBASIC3.63□□□□□ -1.83
CHGBP05060 AC067942.3-201ENST00000512025 362 ntBASIC3.63□□□□□ -1.83
CHGBP05060 RNU6-138P-201ENST00000515952 107 ntBASIC3.63□□□□□ -1.83
CHGBP05060 Y_RNA.713-201ENST00000517013 96 ntBASIC3.63□□□□□ -1.83
CHGBP05060 AC022868.1-201ENST00000517767 391 ntBASIC3.63□□□□□ -1.83
CHGBP05060 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHGBP05060 AL442163.3-201ENST00000554110 156 ntBASIC3.63□□□□□ -1.83
CHGBP05060 RPL23AP78-201ENST00000599928 470 ntBASIC3.63□□□□□ -1.83
CHGBP05060 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.63□□□□□ -1.83
CHGBP05060 MIR376A1-201ENST00000616574 68 ntBASIC3.63□□□□□ -1.83
CHGBP05060 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CHGBP05060 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHGBP05060 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHGBP05060 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
CHGBP05060 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
CHGBP05060 AC233981.2-201ENST00000611524 1614 ntBASIC3.62□□□□□ -1.83
CHGBP05060 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 AL359693.1-201ENST00000614959 2407 ntBASIC3.62□□□□□ -1.83
CHGBP05060 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 FTLP6-201ENST00000355274 422 ntBASIC3.62□□□□□ -1.83
CHGBP05060 Y_RNA.65-201ENST00000362846 100 ntBASIC3.62□□□□□ -1.83
CHGBP05060 RNU6-805P-201ENST00000365643 106 ntBASIC3.62□□□□□ -1.83
CHGBP05060 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 MTCYBP2-201ENST00000407745 171 ntBASIC3.62□□□□□ -1.83
CHGBP05060 Y_RNA.602-201ENST00000410535 92 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.62□□□□□ -1.83
CHGBP05060 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.62□□□□□ -1.83
CHGBP05060 AL512844.2-201ENST00000433990 593 ntBASIC3.62□□□□□ -1.83
CHGBP05060 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.62□□□□□ -1.83
CHGBP05060 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 SNRPGP7-201ENST00000469016 106 ntBASIC3.62□□□□□ -1.83
CHGBP05060 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.62□□□□□ -1.83
CHGBP05060 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.62□□□□□ -1.83
CHGBP05060 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.62□□□□□ -1.83
CHGBP05060 H3F3AP1-201ENST00000559984 334 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.62□□□□□ -1.83
CHGBP05060 CYCSP39-201ENST00000565821 309 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AC023824.2-201ENST00000566185 400 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AC104581.2-201ENST00000572227 430 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AC060766.3-201ENST00000591442 263 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AP001282.2-201ENST00000616149 309 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AC068831.7-201ENST00000616954 363 ntBASIC3.62□□□□□ -1.83
CHGBP05060 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.62□□□□□ -1.83
CHGBP05060 AC241585.2-209ENST00000638217 143 ntBASIC3.62□□□□□ -1.83
CHGBP05060 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHGBP05060 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.61□□□□□ -1.83
CHGBP05060 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CHGBP05060 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.61□□□□□ -1.83
CHGBP05060 AL391987.6-201ENST00000305671 199 ntBASIC3.61□□□□□ -1.83
CHGBP05060 Y_RNA.416-201ENST00000384014 113 ntBASIC3.61□□□□□ -1.83
CHGBP05060 RNU6-926P-201ENST00000384075 107 ntBASIC3.61□□□□□ -1.83
CHGBP05060 RNU6-1197P-201ENST00000391183 107 ntBASIC3.61□□□□□ -1.83
CHGBP05060 RPS29P13-201ENST00000402041 169 ntBASIC3.61□□□□□ -1.83
CHGBP05060 MIR548I3-201ENST00000408378 149 ntBASIC3.61□□□□□ -1.83
CHGBP05060 MIR548I1-201ENST00000408810 149 ntBASIC3.61□□□□□ -1.83
CHGBP05060 Z92545.1-201ENST00000411782 234 ntBASIC3.61□□□□□ -1.83
CHGBP05060 AL139132.1-201ENST00000431587 344 ntBASIC3.61□□□□□ -1.83
CHGBP05060 AC124916.1-201ENST00000444020 547 ntBASIC3.61□□□□□ -1.83
CHGBP05060 AL353705.4-201ENST00000449661 238 ntBASIC3.61□□□□□ -1.83
CHGBP05060 RPL27AP5-201ENST00000469428 449 ntBASIC3.61□□□□□ -1.83
CHGBP05060 GZMAP1-201ENST00000503054 631 ntBASIC3.61□□□□□ -1.83
CHGBP05060 RNU1-103P-201ENST00000516502 125 ntBASIC3.61□□□□□ -1.83
CHGBP05060 SCARNA24.2-201ENST00000516968 130 ntBASIC3.61□□□□□ -1.83
CHGBP05060 RNU6-1183P-201ENST00000517054 60 ntBASIC3.61□□□□□ -1.83
CHGBP05060 AC136932.1-201ENST00000574771 208 ntBASIC3.61□□□□□ -1.83
CHGBP05060 AL451007.1-201ENST00000595491 289 ntBASIC3.61□□□□□ -1.83
CHGBP05060 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.61□□□□□ -1.83
CHGBP05060 AC027309.3-201ENST00000623419 351 ntBASIC3.61□□□□□ -1.83
CHGBP05060 SCARNA4-202ENST00000625402 129 ntBASIC3.61□□□□□ -1.83
CHGBP05060 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHGBP05060 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CHGBP05060 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CHGBP05060 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CHGBP05060 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHGBP05060 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CHGBP05060 MIR148B-201ENST00000362252 99 ntBASIC3.6□□□□□ -1.83
CHGBP05060 Y_RNA.16-201ENST00000362421 102 ntBASIC3.6□□□□□ -1.83
CHGBP05060 snoU2_19.2-201ENST00000363024 80 ntBASIC3.6□□□□□ -1.83
CHGBP05060 RNU6-105P-201ENST00000363909 104 ntBASIC3.6□□□□□ -1.83
CHGBP05060 SNORA71.1-201ENST00000364523 117 ntBASIC3.6□□□□□ -1.83
CHGBP05060 SNORA18.3-201ENST00000384122 132 ntBASIC3.6□□□□□ -1.83
CHGBP05060 Y_RNA.478-201ENST00000384358 107 ntBASIC3.6□□□□□ -1.83
CHGBP05060 U3.37-201ENST00000408528 213 ntBASIC3.6□□□□□ -1.83
CHGBP05060 MIR548H3-201ENST00000408771 118 ntBASIC3.6□□□□□ -1.83
CHGBP05060 RNA5SP293-201ENST00000410527 113 ntBASIC3.6□□□□□ -1.83
CHGBP05060 RNU2-64P-201ENST00000411315 191 ntBASIC3.6□□□□□ -1.83
CHGBP05060 TMEM167AP1-201ENST00000423409 219 ntBASIC3.6□□□□□ -1.83
CHGBP05060 AC125238.1-201ENST00000448842 249 ntBASIC3.6□□□□□ -1.83
CHGBP05060 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.6□□□□□ -1.83
CHGBP05060 ANXA2P1-201ENST00000505539 926 ntBASIC3.6□□□□□ -1.83
CHGBP05060 SNORA43.2-201ENST00000516652 128 ntBASIC3.6□□□□□ -1.83
CHGBP05060 MIR4300-201ENST00000581016 96 ntBASIC3.6□□□□□ -1.83
CHGBP05060 AL512605.2-201ENST00000592972 256 ntBASIC3.6□□□□□ -1.83
CHGBP05060 AC243829.7-201ENST00000633081 225 ntBASIC3.6□□□□□ -1.83
CHGBP05060 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
CHGBP05060 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.59□□□□□ -1.83
CHGBP05060 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.59□□□□□ -1.83
CHGBP05060 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms