Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC010615.1-201ENST00000594254 1764 ntBASIC-0.36□□□□□ -2.47
APOBP04114 MEMO1P3-201ENST00000459811 302 ntBASIC-0.37□□□□□ -2.47
APOBP04114 RNA5SP268-201ENST00000516828 124 ntBASIC-0.37□□□□□ -2.47
APOBP04114 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOBP04114 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.37□□□□□ -2.47
APOBP04114 AL132657.2-201ENST00000564417 358 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC012213.3-201ENST00000577199 777 ntBASIC-0.37□□□□□ -2.47
APOBP04114 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC-0.37□□□□□ -2.47
APOBP04114 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.37□□□□□ -2.47
APOBP04114 RNA5SP259-201ENST00000365541 109 ntBASIC-0.37□□□□□ -2.47
APOBP04114 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.37□□□□□ -2.47
APOBP04114 RNU2-59P-201ENST00000410482 191 ntBASIC-0.37□□□□□ -2.47
APOBP04114 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOBP04114 AC016909.1-201ENST00000415916 166 ntBASIC-0.37□□□□□ -2.47
APOBP04114 MTND1P3-201ENST00000484956 952 ntBASIC-0.37□□□□□ -2.47
APOBP04114 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC-0.37□□□□□ -2.47
APOBP04114 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AP002453.2-201ENST00000533503 320 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AL049870.4-201ENST00000555741 486 ntBASIC-0.37□□□□□ -2.47
APOBP04114 MIR4324-201ENST00000584846 72 ntBASIC-0.37□□□□□ -2.47
APOBP04114 BNIP3P31-201ENST00000604515 566 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC239868.4-201ENST00000608318 671 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AL357080.1-201ENST00000617394 239 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC007490.1-201ENST00000624321 703 ntBASIC-0.37□□□□□ -2.47
APOBP04114 MIR593-201ENST00000384856 100 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC068533.2-201ENST00000411872 306 ntBASIC-0.37□□□□□ -2.47
APOBP04114 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC-0.37□□□□□ -2.47
APOBP04114 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOBP04114 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOBP04114 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.37□□□□□ -2.47
APOBP04114 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOBP04114 FTX_3.1-201ENST00000610451 147 ntBASIC-0.37□□□□□ -2.47
APOBP04114 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.37□□□□□ -2.47
APOBP04114 U6.48-201ENST00000618523 106 ntBASIC-0.37□□□□□ -2.47
APOBP04114 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.37□□□□□ -2.47
APOBP04114 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
APOBP04114 RNU2-43P-201ENST00000410306 190 ntBASIC-0.37□□□□□ -2.47
APOBP04114 USP9YP19-201ENST00000412165 485 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.37□□□□□ -2.47
APOBP04114 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC130509.1-201ENST00000464158 433 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC105029.1-201ENST00000520250 669 ntBASIC-0.37□□□□□ -2.47
APOBP04114 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.37□□□□□ -2.47
APOBP04114 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-0.37□□□□□ -2.47
APOBP04114 AL356057.1-201ENST00000533798 831 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC025678.1-201ENST00000567861 338 ntBASIC-0.37□□□□□ -2.47
APOBP04114 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.37□□□□□ -2.47
APOBP04114 AC138749.5-201ENST00000611461 208 ntBASIC-0.37□□□□□ -2.47
APOBP04114 SNORA18.1-201ENST00000363418 128 ntBASIC-0.38□□□□□ -2.47
APOBP04114 C8orf59P1-201ENST00000429930 303 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.38□□□□□ -2.47
APOBP04114 AC022364.2-201ENST00000457963 554 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC104982.1-201ENST00000478775 574 ntBASIC-0.38□□□□□ -2.47
APOBP04114 HMGB1P30-201ENST00000492455 606 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC-0.38□□□□□ -2.47
APOBP04114 AC022616.2-201ENST00000523185 300 ntBASIC-0.38□□□□□ -2.47
APOBP04114 MIR4436A-201ENST00000585278 85 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.38□□□□□ -2.47
APOBP04114 AL031281.1-201ENST00000604049 488 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AL139396.1-201ENST00000421137 167 ntBASIC-0.38□□□□□ -2.47
APOBP04114 RAC1P6-201ENST00000423911 575 ntBASIC-0.38□□□□□ -2.47
APOBP04114 MTCO3P2-201ENST00000457365 171 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.38□□□□□ -2.47
APOBP04114 AK6P2-201ENST00000549020 471 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC091152.3-201ENST00000604227 325 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC005021.1-201ENST00000608730 355 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC136475.10-201ENST00000620253 385 ntBASIC-0.38□□□□□ -2.47
APOBP04114 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
APOBP04114 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC-0.38□□□□□ -2.47
APOBP04114 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.38□□□□□ -2.47
APOBP04114 snoU109.2-201ENST00000459316 135 ntBASIC-0.38□□□□□ -2.47
APOBP04114 RPF2P2-201ENST00000504693 896 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC067904.2-201ENST00000517322 1283 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC018462.2-201ENST00000605375 395 ntBASIC-0.38□□□□□ -2.47
APOBP04114 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.38□□□□□ -2.47
APOBP04114 RNY4P7-201ENST00000364600 96 ntBASIC-0.38□□□□□ -2.47
APOBP04114 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.38□□□□□ -2.47
APOBP04114 RNU6-756P-201ENST00000383997 107 ntBASIC-0.38□□□□□ -2.47
APOBP04114 MIR520A-201ENST00000384862 85 ntBASIC-0.38□□□□□ -2.47
APOBP04114 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.38□□□□□ -2.47
APOBP04114 RPS26P48-201ENST00000491713 339 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC010460.2-201ENST00000509054 677 ntBASIC-0.38□□□□□ -2.47
APOBP04114 RNU6-488P-201ENST00000515918 99 ntBASIC-0.38□□□□□ -2.47
APOBP04114 SNORA27.4-201ENST00000516650 95 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC010376.1-201ENST00000522101 334 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AP003716.2-201ENST00000528260 108 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
APOBP04114 MRPS36P5-201ENST00000551909 298 ntBASIC-0.38□□□□□ -2.47
APOBP04114 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.38□□□□□ -2.47
APOBP04114 AC008993.2-201ENST00000631744 806 ntBASIC-0.38□□□□□ -2.47
APOBP04114 MIR103A2-201ENST00000362154 78 ntBASIC-0.39□□□□□ -2.47
APOBP04114 RNU6-23P-201ENST00000363283 107 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AL031313.1-201ENST00000448435 256 ntBASIC-0.39□□□□□ -2.47
APOBP04114 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.39□□□□□ -2.47
APOBP04114 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.39□□□□□ -2.47
APOBP04114 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.39□□□□□ -2.47
APOBP04114 AC106038.2-201ENST00000520706 568 ntBASIC-0.39□□□□□ -2.47
APOBP04114 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.39□□□□□ -2.47
APOBP04114 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms