Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AP001893.2-201ENST00000526949 202 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 MIR3941-201ENST00000582572 103 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 HULC.1-201ENST00000612720 240 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 AC090582.1-201ENST00000636321 199 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 SNORD98-201ENST00000636377 67 ntBASIC1.33□□□□□ -2.2
HLA-DQB1P01920 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DQB1P01920 SNORD114-1-201ENST00000362705 72 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.99-201ENST00000363138 105 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RNU1-42P-201ENST00000364033 160 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RNU6-827P-201ENST00000365553 106 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.381-201ENST00000365666 102 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.582-201ENST00000391023 95 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RNA5SP465-201ENST00000391195 109 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 MTCYBP2-201ENST00000407745 171 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RNA5SP201-201ENST00000410316 124 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RN7SKP61-201ENST00000410642 295 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AL358453.1-201ENST00000422522 250 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC244670.1-201ENST00000436879 112 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 HSPE1P21-201ENST00000438283 308 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC023790.1-201ENST00000482174 347 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC104564.1-201ENST00000493028 407 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC079140.5-201ENST00000507882 310 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 SNORA40.12-201ENST00000516329 111 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AP005597.4-201ENST00000526762 229 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC103996.1-201ENST00000555468 102 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC022254.1-201ENST00000567857 235 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC103987.3-201ENST00000582071 292 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 MIR3136-201ENST00000583498 78 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC073648.5-201ENST00000603502 305 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AC017083.3-201ENST00000609955 700 ntBASIC1.32□□□□□ -2.2
HLA-DQB1P01920 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
HLA-DQB1P01920 SNORD115-3-201ENST00000363100 82 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.255-201ENST00000364581 97 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 SNORD116-9-201ENST00000384000 95 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 SNORD116-3-201ENST00000384287 95 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 RNU6-1119P-201ENST00000384349 108 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 SNORD116-7-201ENST00000384404 95 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 SNORD116-5-201ENST00000384462 95 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 RNU6-1245P-201ENST00000411130 106 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AL606489.2-201ENST00000433886 234 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC002486.1-201ENST00000435098 391 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 MTCO2P18-201ENST00000457151 658 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 RPS29P23-201ENST00000458635 123 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 UBL5P3-201ENST00000475112 231 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AL163973.1-201ENST00000484753 577 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC145146.1-201ENST00000496370 254 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC091874.1-201ENST00000511402 339 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 RN7SKP298-201ENST00000515950 94 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 RNU6-991P-201ENST00000516168 107 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC087441.2-201ENST00000529141 262 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC087683.1-201ENST00000591187 441 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC010620.1-201ENST00000601088 1102 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AC107304.1-201ENST00000604229 296 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AL356157.2-201ENST00000605122 111 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 MIR502-201ENST00000606349 86 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.31□□□□□ -2.2
HLA-DQB1P01920 AL354950.2-201ENST00000617939 290 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
HLA-DQB1P01920 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.31□□□□□ -2.2
HLA-DQB1P01920 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.31□□□□□ -2.2
HLA-DQB1P01920 Y_RNA.1-201ENST00000352915 104 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RNU6-743P-201ENST00000364151 106 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 MIR597-201ENST00000384968 97 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 U8.13-201ENST00000390842 128 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RNU11-3P-201ENST00000391111 133 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 BTF3L4P2-201ENST00000392798 346 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC245102.2-201ENST00000448956 180 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AL031274.1-201ENST00000450334 232 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 HSPE1P24-201ENST00000450782 238 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AMD1P1-201ENST00000457220 922 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 AC007547.1-201ENST00000462177 490 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RPS3AP17-201ENST00000472594 777 ntBASIC1.3□□□□□ -2.2
HLA-DQB1P01920 RPL23AP63-201ENST00000498752 471 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms