Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
GGPS1O95749 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.3□□□□□ -2.04
GGPS1O95749 SNORD60.2-201ENST00000516883 86 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AC087854.1-201ENST00000519706 414 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.3□□□□□ -2.04
GGPS1O95749 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.3□□□□□ -2.04
GGPS1O95749 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AP001836.1-201ENST00000604675 523 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.3□□□□□ -2.04
GGPS1O95749 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
GGPS1O95749 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
GGPS1O95749 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
GGPS1O95749 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
GGPS1O95749 RNU6-1106P-201ENST00000390845 107 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 HMGN2P39-201ENST00000398005 273 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.29□□□□□ -2.04
GGPS1O95749 AC078809.1-201ENST00000427601 140 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 CBX3P6-201ENST00000430257 527 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.29□□□□□ -2.04
GGPS1O95749 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.29□□□□□ -2.04
GGPS1O95749 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.29□□□□□ -2.04
GGPS1O95749 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.29□□□□□ -2.04
GGPS1O95749 SNORA19.2-201ENST00000516013 114 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 RNU6-1281P-201ENST00000516223 105 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 RNU6-506P-201ENST00000516553 94 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.29□□□□□ -2.04
GGPS1O95749 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.29□□□□□ -2.04
GGPS1O95749 HSPE1P4-201ENST00000550617 308 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 AC121758.2-201ENST00000553271 193 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 MIR5002-201ENST00000584713 97 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 AL162413.1-201ENST00000603198 110 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 AC063943.3-201ENST00000615562 356 ntBASIC2.29□□□□□ -2.04
GGPS1O95749 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 RNU4-15P-201ENST00000362613 141 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 Y_RNA.167-201ENST00000363735 109 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 Y_RNA.231-201ENST00000364358 102 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 Y_RNA.318-201ENST00000365131 97 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 RNU6-142P-201ENST00000384019 107 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 U8.13-201ENST00000390842 128 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 SNORA26.3-201ENST00000391119 136 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.28□□□□□ -2.04
GGPS1O95749 AL133396.1-201ENST00000432048 687 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 IFNA20P-201ENST00000436840 528 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AL137159.1-201ENST00000452808 512 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.28□□□□□ -2.04
GGPS1O95749 RPL23AP42-201ENST00000471152 471 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AC055731.1-201ENST00000474387 401 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AC107032.1-201ENST00000485945 480 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.28□□□□□ -2.04
GGPS1O95749 AP005597.4-201ENST00000526762 229 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.28□□□□□ -2.04
GGPS1O95749 AK6P1-201ENST00000540219 478 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 MIR4529-201ENST00000578110 78 ntBASIC2.28□□□□□ -2.04
GGPS1O95749 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.28□□□□□ -2.04
GGPS1O95749 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
GGPS1O95749 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.27□□□□□ -2.05
GGPS1O95749 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.27□□□□□ -2.05
GGPS1O95749 AC092268.1-201ENST00000342691 405 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 Y_RNA.372-201ENST00000365599 102 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 RNU6-483P-201ENST00000384088 108 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 RNU6-908P-201ENST00000410160 94 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 RNU6-1068P-201ENST00000410958 103 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AP000275.1-201ENST00000411943 390 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.27□□□□□ -2.05
GGPS1O95749 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.27□□□□□ -2.05
GGPS1O95749 AL590135.1-201ENST00000422215 156 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AC019205.3-201ENST00000424573 156 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AC027124.2-201ENST00000428249 105 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.27□□□□□ -2.05
GGPS1O95749 AC016700.2-201ENST00000446011 156 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AC015911.1-201ENST00000495111 156 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.27□□□□□ -2.05
GGPS1O95749 Y_RNA.704-201ENST00000516851 102 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 RNU2-19P-201ENST00000517288 84 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 RNU6-323P-201ENST00000521915 107 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 MIR5692C1-201ENST00000585309 91 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AL357078.3-201ENST00000607528 618 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AL121757.2-201ENST00000611223 313 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 AP006437.1-201ENST00000641440 3685 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 OR4G1P-203ENST00000641984 1631 ntBASIC2.27□□□□□ -2.05
GGPS1O95749 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
GGPS1O95749 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
GGPS1O95749 RNU6-522P-201ENST00000364497 107 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.26□□□□□ -2.05
GGPS1O95749 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.26□□□□□ -2.05
GGPS1O95749 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.26□□□□□ -2.05
GGPS1O95749 RNU6-717P-201ENST00000459076 104 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 AC145146.1-201ENST00000496370 254 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 AC016632.1-201ENST00000503994 196 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.26□□□□□ -2.05
GGPS1O95749 RNU6-965P-201ENST00000516721 96 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 SNORA31.16-201ENST00000516773 139 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 RNU1-40P-201ENST00000516816 164 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 RNU1-97P-201ENST00000516872 164 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 RNU6-295P-201ENST00000516901 104 ntBASIC2.26□□□□□ -2.05
GGPS1O95749 AL157687.1-201ENST00000554853 619 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms