Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF4O95639 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 AC132479.1-201ENST00000449160 144 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 SCARNA18-201ENST00000459004 134 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 SNRPGP7-201ENST00000469016 106 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
CPSF4O95639 AC093259.1-201ENST00000509755 300 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 RNU6-991P-201ENST00000516168 107 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 RNU6-430P-201ENST00000517078 107 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC109479.2-201ENST00000517842 174 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC115990.1-201ENST00000526957 301 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AL356057.1-201ENST00000533798 831 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 GNAI2P1-201ENST00000541815 315 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF4O95639 MIR4285-201ENST00000581001 85 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.14□□□□□ -2.23
CPSF4O95639 BNIP3P25-201ENST00000596023 559 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF4O95639 AC002044.1-201ENST00000606707 158 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AL512598.1-201ENST00000610158 273 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 AC073114.1-201ENST00000612027 490 ntBASIC1.14□□□□□ -2.23
CPSF4O95639 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.14□□□□□ -2.23
CPSF4O95639 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CPSF4O95639 MIR126-201ENST00000362291 85 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 RNU1-58P-201ENST00000362413 163 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 RNU6-43P-201ENST00000384302 107 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 RNU6-348P-201ENST00000384386 107 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 SNORA12-201ENST00000391162 147 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.13□□□□□ -2.23
CPSF4O95639 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.13□□□□□ -2.23
CPSF4O95639 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 MTND4P32-201ENST00000437189 1237 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 USP9YP29-201ENST00000445112 563 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AC013470.1-201ENST00000453438 462 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 BET1P1-201ENST00000482276 359 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AC079382.1-201ENST00000493346 557 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 MTND3P5-201ENST00000512798 333 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 MIR449C-201ENST00000516047 92 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 SNORA25.17-201ENST00000517184 124 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 AGGF1P4-201ENST00000568249 801 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 AC008752.3-201ENST00000588113 712 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 BNIP3P16-201ENST00000589779 534 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.13□□□□□ -2.23
CPSF4O95639 AC107304.1-201ENST00000604229 296 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AL034555.1-201ENST00000604816 211 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AC018889.1-201ENST00000605372 397 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 AL050343.2-201ENST00000607338 280 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.13□□□□□ -2.23
CPSF4O95639 AC072046.2-201ENST00000618366 268 ntBASIC1.13□□□□□ -2.23
CPSF4O95639 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CPSF4O95639 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 ZNF680P1-201ENST00000436625 1469 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 RNU6-661P-201ENST00000362409 107 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 SNORD32B-201ENST00000364460 84 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 Y_RNA.480-201ENST00000384364 102 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 RNA5SP212-201ENST00000391223 107 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4O95639 RNU2-29P-201ENST00000410423 189 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 RNA5SP501-201ENST00000410990 112 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 AL117339.3-201ENST00000418733 162 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC010975.2-201ENST00000427781 588 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AL031274.1-201ENST00000450334 232 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 RNA5SP57-201ENST00000459463 123 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 GMFBP1-201ENST00000467831 427 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 AC145146.1-201ENST00000496370 254 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.12□□□□□ -2.23
CPSF4O95639 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4O95639 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4O95639 RN7SKP219-201ENST00000516825 296 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 MTCO2P4-201ENST00000517968 247 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.12□□□□□ -2.23
CPSF4O95639 TRAV32-201ENST00000553993 340 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 MTCO3P23-201ENST00000561363 289 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AL391840.1-201ENST00000571144 367 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 MIR4528-201ENST00000577763 90 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.12□□□□□ -2.23
CPSF4O95639 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.12□□□□□ -2.23
CPSF4O95639 AC068790.2-201ENST00000602601 557 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC091805.2-201ENST00000603848 235 ntBASIC1.12□□□□□ -2.23
CPSF4O95639 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms