Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-48P-201ENST00000384161 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-36P-201ENST00000384172 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-1042P-201ENST00000384204 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-4P-201ENST00000384205 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-5P-201ENST00000384238 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-3P-201ENST00000384314 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-434P-201ENST00000384376 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-16P-201ENST00000384385 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-15P-201ENST00000384534 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-2-201ENST00000384627 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-29P-201ENST00000384637 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-9-201ENST00000384776 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-33P-201ENST00000384793 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CTDNEP1O95476 MTCO3P41-201ENST00000414801 328 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 AC008267.5-201ENST00000424928 265 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 MTCO2P7-201ENST00000446518 666 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 SNRPFP3-201ENST00000457792 225 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 AC083798.1-201ENST00000472671 131 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 AC009646.1-201ENST00000510455 318 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 LRRC34P2-201ENST00000514850 553 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 AP001893.2-201ENST00000526949 202 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 AP003034.1-201ENST00000534621 422 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-6P-201ENST00000606623 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 RNU6-91P-201ENST00000607774 107 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 HULC.1-201ENST00000612720 240 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 AC026585.1-201ENST00000619582 524 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.61□□□□□ -2.15
CTDNEP1O95476 SCARNA4-202ENST00000625402 129 ntBASIC1.61□□□□□ -2.15
CTDNEP1O95476 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CTDNEP1O95476 Y_RNA.372-201ENST00000365599 102 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 SNORA69-201ENST00000383895 132 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 SNORD116-4-201ENST00000384733 96 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.6□□□□□ -2.15
CTDNEP1O95476 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 AC007098.1-201ENST00000420122 367 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 TPTE2P5-203ENST00000458118 728 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 RNU6-261P-201ENST00000459506 102 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 RNU6-1038P-201ENST00000516516 104 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 AC107953.1-201ENST00000522216 297 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 AC090115.3-201ENST00000553218 849 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 AC004223.2-201ENST00000590309 544 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 uc_338.34-201ENST00000617467 174 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 AC097372.5-201ENST00000623665 376 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 MIR3529-201ENST00000637713 78 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 U4.7-201ENST00000638126 106 ntBASIC1.6□□□□□ -2.15
CTDNEP1O95476 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.6□□□□□ -2.15
CTDNEP1O95476 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 SNORD56.1-201ENST00000362913 68 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 RNU6-266P-201ENST00000364225 107 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 RNU6-38P-201ENST00000384085 107 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CTDNEP1O95476 RAP1BP3-201ENST00000407180 549 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 RNU6-648P-201ENST00000410190 107 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 AL161788.1-201ENST00000441805 169 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC007969.2-201ENST00000441891 191 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 snoU13.23-201ENST00000458863 104 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 RNU6-333P-201ENST00000459117 107 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 SRRM1P2-201ENST00000464531 1192 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC140059.1-201ENST00000489238 361 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 MTCYBP18-201ENST00000501056 747 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC108210.2-201ENST00000503681 201 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 RNA5SP401-201ENST00000515920 127 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 Y_RNA.693-201ENST00000516641 110 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 Y_RNA.704-201ENST00000516851 102 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC023050.3-201ENST00000541142 333 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 HSBP1P1-201ENST00000555205 166 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC015712.3-201ENST00000559380 164 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AL031274.2-201ENST00000599419 203 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AL713866.2-201ENST00000603579 219 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC064807.4-201ENST00000607201 407 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.59□□□□□ -2.15
CTDNEP1O95476 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CTDNEP1O95476 ZNF72P-201ENST00000425869 1908 ntBASIC1.59□□□□□ -2.15
CTDNEP1O95476 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.59□□□□□ -2.16
CTDNEP1O95476 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU6-1010P-201ENST00000362757 107 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU6-428P-201ENST00000362942 107 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 Y_RNA.167-201ENST00000363735 109 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 U3.13-201ENST00000364804 214 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU5E-7P-201ENST00000365290 117 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU6-487P-201ENST00000365430 104 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 Y_RNA.378-201ENST00000365652 113 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 RNU6-1032P-201ENST00000384100 107 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 MIR186-201ENST00000384988 86 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 MIR95-201ENST00000385072 81 ntBASIC1.58□□□□□ -2.16
CTDNEP1O95476 SNORA40.19-201ENST00000390846 128 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms