Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 HMGB1P28-201ENST00000507778 552 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC106038.2-201ENST00000520706 568 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 VN1R88P-201ENST00000596787 292 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC104408.1-201ENST00000605241 170 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AL353149.1-201ENST00000610667 244 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 AC004009.2-201ENST00000623016 728 ntBASIC-0.32□□□□□ -2.46
LTN1O94822 MIR1468-201ENST00000410600 86 ntBASIC-0.33□□□□□ -2.46
LTN1O94822 RNU6-947P-201ENST00000516264 106 ntBASIC-0.33□□□□□ -2.46
LTN1O94822 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.33□□□□□ -2.46
LTN1O94822 AL118556.2-201ENST00000614375 824 ntBASIC-0.33□□□□□ -2.46
LTN1O94822 RNA5SP504-201ENST00000410676 117 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 RNU6-564P-201ENST00000410983 104 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC-0.34□□□□□ -2.46
LTN1O94822 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.34□□□□□ -2.46
LTN1O94822 RNU6-840P-201ENST00000517275 65 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 AC022861.1-201ENST00000522981 663 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.34□□□□□ -2.46
LTN1O94822 MRPS36P5-201ENST00000551909 298 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 BNIP3P24-201ENST00000593398 557 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 MIR3976-201ENST00000606807 139 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
LTN1O94822 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 RNU6-331P-201ENST00000384724 107 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 MIR525-201ENST00000384978 85 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 OR6C5P-201ENST00000452388 923 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 RNU7-21P-201ENST00000459430 62 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.34□□□□□ -2.46
LTN1O94822 AC023194.1-201ENST00000493084 308 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.34□□□□□ -2.46
LTN1O94822 AC109810.1-201ENST00000534066 224 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 RNU4-5P-201ENST00000607255 135 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 AL603758.1-201ENST00000618654 241 ntBASIC-0.34□□□□□ -2.46
LTN1O94822 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
LTN1O94822 SNORD116-13-201ENST00000384408 92 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 MIR29B2-201ENST00000385055 81 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 ELOCP9-201ENST00000418624 239 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 AC073261.1-201ENST00000429409 121 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 MTND2P5-201ENST00000432656 1006 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.35□□□□□ -2.47
LTN1O94822 HMGB1P30-201ENST00000492455 606 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.35□□□□□ -2.47
LTN1O94822 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.35□□□□□ -2.47
LTN1O94822 SNORA25.12-201ENST00000516202 82 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 MIR4782-201ENST00000577987 79 ntBASIC-0.35□□□□□ -2.47
LTN1O94822 SNORA9.1-201ENST00000362412 131 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 MIR421-201ENST00000365696 85 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 MIR153-2-201ENST00000385225 87 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 CBX3P9-201ENST00000402326 552 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.36□□□□□ -2.47
LTN1O94822 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC-0.36□□□□□ -2.47
LTN1O94822 AC097065.2-201ENST00000608159 533 ntBASIC-0.36□□□□□ -2.47
LTN1O94822 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC-0.36□□□□□ -2.47
LTN1O94822 MIR643-201ENST00000385267 97 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.37□□□□□ -2.47
LTN1O94822 GPM6BP2-201ENST00000432046 144 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC243964.1-201ENST00000441814 261 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 GPM6BP1-201ENST00000446387 144 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 RPS3AP17-201ENST00000472594 777 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 SUMO2P18-201ENST00000518873 252 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC098483.2-201ENST00000603158 454 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC004853.1-201ENST00000604902 698 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AL451064.1-201ENST00000607718 471 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 SEC63P2-201ENST00000503863 1939 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
LTN1O94822 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
LTN1O94822 MTND1P20-201ENST00000430341 950 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AL008629.1-201ENST00000438615 184 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC069257.2-201ENST00000441819 155 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 SNORD57-201ENST00000448188 72 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.37□□□□□ -2.47
LTN1O94822 MTCO3P28-201ENST00000513351 515 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC116165.2-201ENST00000616705 206 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AC136475.10-201ENST00000620253 385 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AP000943.4-201ENST00000622912 357 ntBASIC-0.37□□□□□ -2.47
LTN1O94822 AL079343.1-201ENST00000572358 1771 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 RNU6-674P-201ENST00000363831 107 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 RNU6-878P-201ENST00000384578 110 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 MIR635-201ENST00000384830 98 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.38□□□□□ -2.47
LTN1O94822 MTATP6P27-201ENST00000416987 621 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 AC002486.1-201ENST00000435098 391 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 AC093012.1-202ENST00000549403 582 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 AL355598.1-201ENST00000604169 202 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 AC011451.2-201ENST00000604303 598 ntBASIC-0.38□□□□□ -2.47
LTN1O94822 SNORA42.1-201ENST00000363515 137 ntBASIC-0.39□□□□□ -2.47
LTN1O94822 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
LTN1O94822 MIR140-201ENST00000385282 100 ntBASIC-0.39□□□□□ -2.47
LTN1O94822 RNU6-754P-201ENST00000391166 107 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms