Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 AC073410.2-201ENST00000603240 332 ntBASIC3.32□□□□□ -1.88
KDM1AO60341 7SK.10-201ENST00000621414 298 ntBASIC3.32□□□□□ -1.88
KDM1AO60341 SNORD98-201ENST00000636377 67 ntBASIC3.32□□□□□ -1.88
KDM1AO60341 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KDM1AO60341 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.32□□□□□ -1.88
KDM1AO60341 Z83843.1-201ENST00000604070 3685 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 AL109809.4-201ENST00000603520 2185 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 Y_RNA.40-201ENST00000362645 93 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 Y_RNA.152-201ENST00000363578 100 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 RNU6-196P-201ENST00000384315 107 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 SNORD17-201ENST00000390930 237 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 YME1L1P1-201ENST00000429435 297 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.31□□□□□ -1.88
KDM1AO60341 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
KDM1AO60341 snoU13.6-201ENST00000458785 104 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 AC006445.1-201ENST00000491925 405 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 AIG1P1-201ENST00000503376 148 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 SLC25A15P5-201ENST00000508033 253 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 AC131281.1-201ENST00000522984 164 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 AL442163.3-201ENST00000554110 156 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.31□□□□□ -1.88
KDM1AO60341 AL078605.1-201ENST00000603529 500 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
KDM1AO60341 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KDM1AO60341 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.31□□□□□ -1.88
KDM1AO60341 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KDM1AO60341 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.31□□□□□ -1.88
KDM1AO60341 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
KDM1AO60341 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.3□□□□□ -1.88
KDM1AO60341 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
KDM1AO60341 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KDM1AO60341 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
KDM1AO60341 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.3□□□□□ -1.88
KDM1AO60341 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 MIR148B-201ENST00000362252 99 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 Y_RNA.27-201ENST00000362540 103 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 Y_RNA.319-201ENST00000365138 92 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 RNU1-139P-201ENST00000391307 165 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 UBA52P6-201ENST00000399822 382 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 RPS26P42-201ENST00000413485 326 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AC012306.1-201ENST00000423267 114 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.3□□□□□ -1.88
KDM1AO60341 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM1AO60341 U8.22-201ENST00000459141 133 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AC146507.2-201ENST00000460608 476 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AP000870.1-201ENST00000472927 406 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.3□□□□□ -1.88
KDM1AO60341 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM1AO60341 RNU6-1114P-201ENST00000516022 107 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 RNU5F-2P-201ENST00000516066 82 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 RNU6-635P-201ENST00000516651 102 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.3□□□□□ -1.88
KDM1AO60341 AC079598.5-201ENST00000547460 117 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.3□□□□□ -1.88
KDM1AO60341 AC027288.2-201ENST00000553028 243 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM1AO60341 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.3□□□□□ -1.88
KDM1AO60341 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 AC002064.3-201ENST00000623448 346 ntBASIC3.3□□□□□ -1.88
KDM1AO60341 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.3□□□□□ -1.88
KDM1AO60341 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KDM1AO60341 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KDM1AO60341 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.29□□□□□ -1.88
KDM1AO60341 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM1AO60341 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM1AO60341 RNU1-76P-201ENST00000362903 159 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RNU6-529P-201ENST00000363383 104 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 Y_RNA.176-201ENST00000363815 109 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 Y_RNA.210-201ENST00000364161 110 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RNU1-33P-201ENST00000364249 162 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RNU4-56P-201ENST00000364700 142 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RNU6-1027P-201ENST00000383998 107 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 Y_RNA.551-201ENST00000384661 102 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 Y_RNA.574-201ENST00000384766 95 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 MIR186-201ENST00000384988 86 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM1AO60341 AL358075.3-201ENST00000426289 226 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM1AO60341 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM1AO60341 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM1AO60341 AC112771.1-201ENST00000463581 102 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RPL36AP48-201ENST00000485521 314 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 HMGB1P35-201ENST00000503360 598 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RAC1P5-201ENST00000512182 576 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 SNORA31.6-201ENST00000516241 130 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 AC034114.1-201ENST00000520293 285 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.29□□□□□ -1.88
KDM1AO60341 AP002770.2-201ENST00000543613 532 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms