Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC090888.2-201ENST00000559765 1144 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AP001004.1-201ENST00000582468 324 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AC069431.2-201ENST00000604149 1099 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 AL512598.1-201ENST00000610158 273 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.69□□□□□ -2.3
SSNA1O43805 AC241585.2-209ENST00000638217 143 ntBASIC0.69□□□□□ -2.3
SSNA1O43805 HSBP1P2-201ENST00000299671 229 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-1123P-201ENST00000362347 106 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-37P-201ENST00000362692 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU1-76P-201ENST00000362903 159 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 SNORA33-201ENST00000363664 130 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-931P-201ENST00000363850 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-11P-201ENST00000364234 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-336P-201ENST00000364891 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-25P-201ENST00000383873 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-1-201ENST00000383898 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-48P-201ENST00000384161 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-36P-201ENST00000384172 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-4P-201ENST00000384205 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-5P-201ENST00000384238 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-3P-201ENST00000384314 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-378P-201ENST00000384324 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-16P-201ENST00000384385 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-15P-201ENST00000384534 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-2-201ENST00000384627 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-29P-201ENST00000384637 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-9-201ENST00000384776 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-33P-201ENST00000384793 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU2-64P-201ENST00000411315 191 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 MTND1P20-201ENST00000430341 950 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.68□□□□□ -2.3
SSNA1O43805 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RPS27P1-201ENST00000450552 247 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.68□□□□□ -2.3
SSNA1O43805 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.68□□□□□ -2.3
SSNA1O43805 USP9YP25-201ENST00000457708 443 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 AC010587.1-201ENST00000505809 469 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.68□□□□□ -2.3
SSNA1O43805 AC011406.1-201ENST00000512440 370 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-377P-201ENST00000515965 102 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 SUMO2P16-201ENST00000519475 264 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
SSNA1O43805 HSPE1P4-201ENST00000550617 308 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.68□□□□□ -2.3
SSNA1O43805 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.68□□□□□ -2.3
SSNA1O43805 MIR4742-201ENST00000581069 85 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 AC078795.3-201ENST00000602913 472 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 RNU6-6P-201ENST00000606623 107 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 AL353149.1-201ENST00000610667 244 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
SSNA1O43805 AL139418.1-201ENST00000613613 177 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 AL157834.3-201ENST00000615543 103 ntBASIC0.68□□□□□ -2.3
SSNA1O43805 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.67□□□□□ -2.3
SSNA1O43805 SNORD32A-201ENST00000364805 84 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 RNU6-534P-201ENST00000364877 106 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 MIR558-201ENST00000384920 94 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC137499.1-201ENST00000427602 88 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 MED13P1-201ENST00000428342 171 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC119618.1-201ENST00000434191 222 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 RPL37P21-201ENST00000435890 276 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC091435.1-201ENST00000505442 584 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 PDCD5P2-201ENST00000507570 312 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.67□□□□□ -2.3
SSNA1O43805 AC108043.1-201ENST00000512696 574 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 SNORA31.2-201ENST00000516019 134 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 RN7SKP49-201ENST00000516675 260 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.67□□□□□ -2.3
SSNA1O43805 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 BNIP3P16-201ENST00000589779 534 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.67□□□□□ -2.3
SSNA1O43805 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
SSNA1O43805 AC008163.1-202ENST00000636004 2889 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 Y_RNA.22-201ENST00000362492 102 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNU6-428P-201ENST00000362942 107 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 U3.4-201ENST00000363352 213 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 Y_RNA.132-201ENST00000363421 102 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNU6-418P-201ENST00000384035 107 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 SNORA70B-201ENST00000384210 135 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNU6-910P-201ENST00000390844 107 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 SNORA11.1-201ENST00000408133 129 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RPS27AP14-201ENST00000422868 454 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RPS6P15-201ENST00000431996 751 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.66□□□□□ -2.3
SSNA1O43805 C1DP4-201ENST00000455429 424 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 MTCO2P29-201ENST00000465212 189 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNA5SP168-201ENST00000516642 112 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RNU6-685P-201ENST00000517088 95 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.66□□□□□ -2.3
SSNA1O43805 MTND4LP18-201ENST00000526864 291 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 AP003181.2-201ENST00000528941 181 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
SSNA1O43805 EIF4A1P12-201ENST00000551910 141 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 AC090517.1-201ENST00000569307 266 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 AC105129.3-201ENST00000605455 485 ntBASIC0.66□□□□□ -2.3
SSNA1O43805 AC008945.2-201ENST00000606056 604 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms