Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHOXO15266 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SHOXO15266 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SHOXO15266 AL353746.1-201ENST00000566293 6881 ntBASIC3.51□□□□□ -1.85
SHOXO15266 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.5□□□□□ -1.85
SHOXO15266 MIR549A-201ENST00000385268 96 ntBASIC3.5□□□□□ -1.85
SHOXO15266 PCNPP3-201ENST00000393579 471 ntBASIC3.5□□□□□ -1.85
SHOXO15266 RN7SKP27-201ENST00000410684 333 ntBASIC3.5□□□□□ -1.85
SHOXO15266 RPL23AP81-201ENST00000455252 467 ntBASIC3.5□□□□□ -1.85
SHOXO15266 SNORD2.1-201ENST00000458762 69 ntBASIC3.5□□□□□ -1.85
SHOXO15266 AC091179.1-201ENST00000461606 579 ntBASIC3.5□□□□□ -1.85
SHOXO15266 AC091153.1-201ENST00000466297 402 ntBASIC3.5□□□□□ -1.85
SHOXO15266 RPL36AP48-201ENST00000485521 314 ntBASIC3.5□□□□□ -1.85
SHOXO15266 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.5□□□□□ -1.85
SHOXO15266 AC107393.1-201ENST00000512403 346 ntBASIC3.5□□□□□ -1.85
SHOXO15266 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.5□□□□□ -1.85
SHOXO15266 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.5□□□□□ -1.85
SHOXO15266 MIR6780A-201ENST00000615089 68 ntBASIC3.5□□□□□ -1.85
SHOXO15266 MIR6891-201ENST00000618788 93 ntBASIC3.5□□□□□ -1.85
SHOXO15266 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.5□□□□□ -1.85
SHOXO15266 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.5□□□□□ -1.85
SHOXO15266 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHOXO15266 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHOXO15266 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.5□□□□□ -1.85
SHOXO15266 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
SHOXO15266 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHOXO15266 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SHOXO15266 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHOXO15266 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 RNU6-746P-201ENST00000384112 109 ntBASIC3.49□□□□□ -1.85
SHOXO15266 SNORD66.1-201ENST00000391230 76 ntBASIC3.49□□□□□ -1.85
SHOXO15266 Y_RNA.597-201ENST00000410463 100 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.49□□□□□ -1.85
SHOXO15266 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.49□□□□□ -1.85
SHOXO15266 HMGN2P20-201ENST00000437531 273 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 AL392103.1-201ENST00000447000 198 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AC112771.1-201ENST00000463581 102 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AC145146.1-201ENST00000496370 254 ntBASIC3.49□□□□□ -1.85
SHOXO15266 RNU6-107P-201ENST00000516643 102 ntBASIC3.49□□□□□ -1.85
SHOXO15266 IGLVIV-65-201ENST00000517313 360 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.49□□□□□ -1.85
SHOXO15266 AC087441.2-201ENST00000529141 262 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AC055872.1-201ENST00000570978 278 ntBASIC3.49□□□□□ -1.85
SHOXO15266 AL670379.2-201ENST00000604983 252 ntBASIC3.49□□□□□ -1.85
SHOXO15266 MIR7702-201ENST00000621931 59 ntBASIC3.49□□□□□ -1.85
SHOXO15266 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHOXO15266 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.49□□□□□ -1.85
SHOXO15266 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHOXO15266 AC093010.3-201ENST00000570269 15214 ntBASIC3.49□□□□□ -1.85
SHOXO15266 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
SHOXO15266 AC069528.2-201ENST00000624849 1991 ntBASIC3.49□□□□□ -1.85
SHOXO15266 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
SHOXO15266 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHOXO15266 RNU4-15P-201ENST00000362613 141 ntBASIC3.48□□□□□ -1.85
SHOXO15266 Y_RNA.101-201ENST00000363154 102 ntBASIC3.48□□□□□ -1.85
SHOXO15266 MIR591-201ENST00000385290 95 ntBASIC3.48□□□□□ -1.85
SHOXO15266 ELOCP19-201ENST00000411919 318 ntBASIC3.48□□□□□ -1.85
SHOXO15266 COX6CP10-201ENST00000416832 224 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AC027124.2-201ENST00000428249 105 ntBASIC3.48□□□□□ -1.85
SHOXO15266 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
SHOXO15266 AL500522.2-201ENST00000448562 343 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AL031183.1-201ENST00000457667 207 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AC109925.1-201ENST00000478069 331 ntBASIC3.48□□□□□ -1.85
SHOXO15266 RPL23AP70-201ENST00000483361 460 ntBASIC3.48□□□□□ -1.85
SHOXO15266 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.48□□□□□ -1.85
SHOXO15266 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.48□□□□□ -1.85
SHOXO15266 RNU6-1212P-201ENST00000517023 104 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AC079598.5-201ENST00000547460 117 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.48□□□□□ -1.85
SHOXO15266 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.48□□□□□ -1.85
SHOXO15266 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.48□□□□□ -1.85
SHOXO15266 RPL17P51-201ENST00000605218 238 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.48□□□□□ -1.85
SHOXO15266 uc_338.13-201ENST00000618243 179 ntBASIC3.48□□□□□ -1.85
SHOXO15266 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.48□□□□□ -1.85
SHOXO15266 AC018692.3-201ENST00000623929 123 ntBASIC3.48□□□□□ -1.85
SHOXO15266 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
SHOXO15266 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
SHOXO15266 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.47□□□□□ -1.85
SHOXO15266 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SHOXO15266 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SHOXO15266 MIR331-201ENST00000362302 94 ntBASIC3.47□□□□□ -1.85
SHOXO15266 RNU4-80P-201ENST00000363200 141 ntBASIC3.47□□□□□ -1.85
SHOXO15266 Y_RNA.217-201ENST00000364214 105 ntBASIC3.47□□□□□ -1.85
SHOXO15266 RNA5SP354-201ENST00000391247 136 ntBASIC3.47□□□□□ -1.85
SHOXO15266 SNORA11F-201ENST00000408237 128 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AL356387.2-201ENST00000422272 243 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AL365496.1-201ENST00000426885 215 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC004386.2-201ENST00000441858 148 ntBASIC3.47□□□□□ -1.85
SHOXO15266 RPS29P31-201ENST00000446147 164 ntBASIC3.47□□□□□ -1.85
SHOXO15266 PHBP16-201ENST00000446318 950 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC009237.7-201ENST00000447357 229 ntBASIC3.47□□□□□ -1.85
SHOXO15266 Y_RNA.641-201ENST00000459414 105 ntBASIC3.47□□□□□ -1.85
SHOXO15266 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.47□□□□□ -1.85
SHOXO15266 Y_RNA.662-201ENST00000516028 97 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms