Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 Y_RNA.414-201ENST00000384011 101 ntBASIC2.04□□□□□ -2.08
CDX4O14627 Y_RNA.530-201ENST00000384587 101 ntBASIC2.04□□□□□ -2.08
CDX4O14627 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CDX4O14627 SNORA48.3-201ENST00000391081 134 ntBASIC2.04□□□□□ -2.08
CDX4O14627 SNORA40.18-201ENST00000391200 128 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AC019129.1-201ENST00000403786 261 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX4O14627 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.04□□□□□ -2.08
CDX4O14627 MICF-203ENST00000432679 129 ntBASIC2.04□□□□□ -2.08
CDX4O14627 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.04□□□□□ -2.08
CDX4O14627 HAUS6P2-201ENST00000433254 2404 ntBASIC2.04□□□□□ -2.08
CDX4O14627 FABP5P14-201ENST00000437273 393 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AP000705.1-201ENST00000454567 350 ntBASIC2.04□□□□□ -2.08
CDX4O14627 PPP1R2P5-201ENST00000457256 603 ntBASIC2.04□□□□□ -2.08
CDX4O14627 RNU7-167P-201ENST00000459160 62 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AC087884.1-201ENST00000469738 328 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AC117503.1-201ENST00000472241 394 ntBASIC2.04□□□□□ -2.08
CDX4O14627 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.04□□□□□ -2.08
CDX4O14627 RPL7P43-201ENST00000478876 753 ntBASIC2.04□□□□□ -2.08
CDX4O14627 MRPL42P6-201ENST00000486397 371 ntBASIC2.04□□□□□ -2.08
CDX4O14627 MTND4P29-201ENST00000503122 1372 ntBASIC2.04□□□□□ -2.08
CDX4O14627 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.04□□□□□ -2.08
CDX4O14627 MTCO3P23-201ENST00000561363 289 ntBASIC2.04□□□□□ -2.08
CDX4O14627 MIR3670-2-201ENST00000582974 65 ntBASIC2.04□□□□□ -2.08
CDX4O14627 MIR3670-1-201ENST00000584160 65 ntBASIC2.04□□□□□ -2.08
CDX4O14627 MIR3670-3-201ENST00000584855 65 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AC060766.3-201ENST00000591442 263 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AC243960.4-201ENST00000600532 288 ntBASIC2.04□□□□□ -2.08
CDX4O14627 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDX4O14627 MIR3670-4-201ENST00000612260 65 ntBASIC2.04□□□□□ -2.08
CDX4O14627 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.04□□□□□ -2.08
CDX4O14627 AL109809.4-201ENST00000603520 2185 ntBASIC2.03□□□□□ -2.08
CDX4O14627 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX4O14627 AC073544.1-201ENST00000600110 1595 ntBASIC2.03□□□□□ -2.08
CDX4O14627 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX4O14627 Y_RNA.61-201ENST00000362835 102 ntBASIC2.03□□□□□ -2.08
CDX4O14627 RNU6-254P-201ENST00000363377 107 ntBASIC2.03□□□□□ -2.08
CDX4O14627 Y_RNA.166-201ENST00000363730 102 ntBASIC2.03□□□□□ -2.08
CDX4O14627 Y_RNA.301-201ENST00000364990 103 ntBASIC2.03□□□□□ -2.08
CDX4O14627 RNU6-1328P-201ENST00000410938 106 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.03□□□□□ -2.08
CDX4O14627 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX4O14627 AP001324.2-201ENST00000461163 319 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX4O14627 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX4O14627 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX4O14627 MTND3P22-201ENST00000510932 243 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.03□□□□□ -2.08
CDX4O14627 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX4O14627 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.03□□□□□ -2.08
CDX4O14627 RNU5B-3P-201ENST00000516601 115 ntBASIC2.03□□□□□ -2.08
CDX4O14627 RNU6-1088P-201ENST00000516850 104 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC105029.1-201ENST00000520250 669 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC110588.1-201ENST00000559699 137 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.03□□□□□ -2.08
CDX4O14627 AC008121.1-201ENST00000603244 268 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC002044.1-201ENST00000606707 158 ntBASIC2.03□□□□□ -2.08
CDX4O14627 RMST_7.1-201ENST00000621935 268 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AL031601.2-202ENST00000622650 282 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC022140.2-201ENST00000623500 188 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AC138627.2-201ENST00000624202 601 ntBASIC2.03□□□□□ -2.08
CDX4O14627 AL359697.1-201ENST00000624879 587 ntBASIC2.03□□□□□ -2.08
CDX4O14627 TPTEP1-208ENST00000636884 213 ntBASIC2.03□□□□□ -2.08
CDX4O14627 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.03□□□□□ -2.08
CDX4O14627 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDX4O14627 AC121333.1-201ENST00000567488 2709 ntBASIC2.03□□□□□ -2.09
CDX4O14627 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
CDX4O14627 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDX4O14627 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.02□□□□□ -2.09
CDX4O14627 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDX4O14627 RNU4-73P-201ENST00000363164 141 ntBASIC2.02□□□□□ -2.09
CDX4O14627 SNORD113-7-201ENST00000363762 77 ntBASIC2.02□□□□□ -2.09
CDX4O14627 RNU6-384P-201ENST00000364900 104 ntBASIC2.02□□□□□ -2.09
CDX4O14627 RNU1-51P-201ENST00000365345 176 ntBASIC2.02□□□□□ -2.09
CDX4O14627 EIF4E2P1-201ENST00000393781 255 ntBASIC2.02□□□□□ -2.09
CDX4O14627 FTH1P15-201ENST00000406984 280 ntBASIC2.02□□□□□ -2.09
CDX4O14627 PGBD4P6-201ENST00000421501 610 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX4O14627 NDUFA5P4-201ENST00000436704 385 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.02□□□□□ -2.09
CDX4O14627 AMD1P1-201ENST00000457220 922 ntBASIC2.02□□□□□ -2.09
CDX4O14627 MED28P2-201ENST00000475771 317 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX4O14627 SNORA19.2-201ENST00000516013 114 ntBASIC2.02□□□□□ -2.09
CDX4O14627 RNU1-86P-201ENST00000516108 154 ntBASIC2.02□□□□□ -2.09
CDX4O14627 SNORA14.1-201ENST00000516113 141 ntBASIC2.02□□□□□ -2.09
CDX4O14627 SNORA31.6-201ENST00000516241 130 ntBASIC2.02□□□□□ -2.09
CDX4O14627 RNU6-864P-201ENST00000516256 108 ntBASIC2.02□□□□□ -2.09
CDX4O14627 Y_RNA.687-201ENST00000516558 91 ntBASIC2.02□□□□□ -2.09
CDX4O14627 RNU1-107P-201ENST00000516617 154 ntBASIC2.02□□□□□ -2.09
CDX4O14627 SCARNA3-201ENST00000517097 143 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AC069113.1-201ENST00000517763 267 ntBASIC2.02□□□□□ -2.09
CDX4O14627 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX4O14627 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX4O14627 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.02□□□□□ -2.09
CDX4O14627 AC023824.2-201ENST00000566185 400 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AC005668.1-201ENST00000571142 476 ntBASIC2.02□□□□□ -2.09
CDX4O14627 MIR3672-201ENST00000584290 82 ntBASIC2.02□□□□□ -2.09
CDX4O14627 MIR5692C1-201ENST00000585309 91 ntBASIC2.02□□□□□ -2.09
CDX4O14627 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms