Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 RNU5A-2P-201ENST00000384337 116 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 MT-TH-201ENST00000387441 69 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 RNU2-41P-201ENST00000410991 178 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.33□□□□□ -2.2
SIRPB1O00241 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.33□□□□□ -2.2
SIRPB1O00241 AL365203.2-201ENST00000423444 196 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.33□□□□□ -2.2
SIRPB1O00241 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.33□□□□□ -2.2
SIRPB1O00241 AL357134.1-201ENST00000445848 426 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AC022364.2-201ENST00000457963 554 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.33□□□□□ -2.2
SIRPB1O00241 HMGN1P13-201ENST00000505795 138 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.33□□□□□ -2.2
SIRPB1O00241 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.33□□□□□ -2.2
SIRPB1O00241 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.33□□□□□ -2.2
SIRPB1O00241 MTCO3P28-201ENST00000513351 515 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AC060788.1-201ENST00000521318 469 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 MIR3945-201ENST00000581853 98 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AC078795.3-201ENST00000602913 472 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 AL356157.2-201ENST00000605122 111 ntBASIC1.33□□□□□ -2.2
SIRPB1O00241 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SIRPB1O00241 FGF7P2-201ENST00000332473 296 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RNU6-552P-201ENST00000362869 119 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RNU6-266P-201ENST00000364225 107 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 Y_RNA.504-201ENST00000384481 104 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RNU6-296P-201ENST00000384608 107 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RNY3P10-201ENST00000384764 102 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 SNORA12.2-201ENST00000391040 156 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 SNORA26.3-201ENST00000391119 136 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AC068050.1-201ENST00000394891 380 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 MIR1267-201ENST00000408723 78 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.32□□□□□ -2.2
SIRPB1O00241 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
SIRPB1O00241 AC133104.1-201ENST00000429100 218 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.32□□□□□ -2.2
SIRPB1O00241 AL133217.1-201ENST00000450980 425 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RPS27AP8-201ENST00000452665 445 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.32□□□□□ -2.2
SIRPB1O00241 SNRPGP9-201ENST00000456025 225 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RPL31P3-201ENST00000458430 332 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 SCARNA18-201ENST00000459004 134 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 RNU7-14P-201ENST00000459331 62 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 snoU13.15-201ENST00000459407 104 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 snoU13.26-201ENST00000459452 105 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AC023790.1-201ENST00000482174 347 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.32□□□□□ -2.2
SIRPB1O00241 AC016632.1-201ENST00000503994 196 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AC079140.5-201ENST00000507882 310 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.32□□□□□ -2.2
SIRPB1O00241 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
SIRPB1O00241 MIR4422-201ENST00000581938 83 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 VN1R80P-201ENST00000597126 338 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 BX248123.2-201ENST00000606318 124 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 PCGEM1.1-201ENST00000613431 131 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SIRPB1O00241 AL391262.2-201ENST00000622466 494 ntBASIC1.32□□□□□ -2.2
SIRPB1O00241 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.32□□□□□ -2.2
SIRPB1O00241 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SIRPB1O00241 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SIRPB1O00241 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SIRPB1O00241 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 MIR1261-201ENST00000408659 82 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 CYCSP49-201ENST00000420810 319 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 AL358453.1-201ENST00000422522 250 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.31□□□□□ -2.2
SIRPB1O00241 RPL23AP95-201ENST00000426806 265 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.31□□□□□ -2.2
SIRPB1O00241 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.31□□□□□ -2.2
SIRPB1O00241 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 TOMM22P6-201ENST00000465035 409 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.31□□□□□ -2.2
SIRPB1O00241 RN7SL429P-201ENST00000479090 223 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 RN7SL489P-201ENST00000486185 223 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 RN7SL327P-201ENST00000488659 223 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.31□□□□□ -2.2
SIRPB1O00241 RNU5F-4P-201ENST00000516581 114 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 RNU6-1098P-201ENST00000516772 96 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SIRPB1O00241 AP002963.1-201ENST00000530590 184 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 AP003034.1-201ENST00000534621 422 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 HMGB1P33-201ENST00000563485 527 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 RN7SL853P-201ENST00000617250 223 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 AC136475.10-201ENST00000620253 385 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.31□□□□□ -2.2
SIRPB1O00241 AC068205.3-201ENST00000636385 468 ntBASIC1.31□□□□□ -2.2
SIRPB1O00241 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SIRPB1O00241 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SIRPB1O00241 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SIRPB1O00241 RNU6-181P-201ENST00000363225 107 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 Y_RNA.201-201ENST00000364052 96 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 RNU6-378P-201ENST00000384324 107 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 SNORA26.8-201ENST00000391306 124 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 SNORA26.9-201ENST00000391322 122 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
SIRPB1O00241 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 RNU2-9P-201ENST00000410194 145 ntBASIC1.3□□□□□ -2.2
SIRPB1O00241 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms