Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX39AO00148 MTCO2P34-201ENST00000421994 607 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 AC078809.1-201ENST00000427601 140 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 SNAP23P1-201ENST00000433229 246 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.96□□□□□ -2.1
DDX39AO00148 RNU6-333P-201ENST00000459117 107 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 RNU7-167P-201ENST00000459160 62 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 HMGB3P17-201ENST00000504195 649 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX39AO00148 AC010493.1-201ENST00000513479 292 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 MIR449C-201ENST00000516047 92 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 SNORA31.16-201ENST00000516773 139 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 RNU6-250P-201ENST00000516958 103 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX39AO00148 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.96□□□□□ -2.1
DDX39AO00148 AC022254.1-201ENST00000567857 235 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 AC008088.1-201ENST00000580993 280 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 AC087752.4-201ENST00000605911 462 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 AL158063.1-201ENST00000615349 536 ntBASIC1.96□□□□□ -2.1
DDX39AO00148 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
DDX39AO00148 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DDX39AO00148 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX39AO00148 RNU6-234P-201ENST00000365229 104 ntBASIC1.95□□□□□ -2.1
DDX39AO00148 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.95□□□□□ -2.1
DDX39AO00148 SRIP2-201ENST00000428470 166 ntBASIC1.95□□□□□ -2.1
DDX39AO00148 RNU7-63P-201ENST00000459054 62 ntBASIC1.95□□□□□ -2.1
DDX39AO00148 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX39AO00148 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX39AO00148 AC103996.1-201ENST00000555468 102 ntBASIC1.95□□□□□ -2.1
DDX39AO00148 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX39AO00148 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
DDX39AO00148 CBX3P1-201ENST00000325243 554 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 AC092268.1-201ENST00000342691 405 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 SNORD32A-201ENST00000364805 84 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
DDX39AO00148 RNU6-26P-201ENST00000383985 107 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 RNU6-348P-201ENST00000384386 107 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 RNU6-482P-201ENST00000391068 107 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 RNU6-903P-201ENST00000391270 109 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.94□□□□□ -2.1
DDX39AO00148 USP9YP29-201ENST00000445112 563 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 AL035666.1-201ENST00000446195 348 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 AC005741.1-201ENST00000511094 432 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 AC007834.2-201ENST00000536310 343 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 HIF1AP1-201ENST00000553642 175 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 MIR4528-201ENST00000577763 90 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 MTATP6P3-201ENST00000581686 676 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.94□□□□□ -2.1
DDX39AO00148 AC008147.4-201ENST00000617570 1204 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 AC078883.4-201ENST00000623218 367 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
DDX39AO00148 MTND4P23-201ENST00000447723 1363 ntBASIC1.94□□□□□ -2.1
DDX39AO00148 Y_RNA.140-201ENST00000363474 103 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 Y_RNA.159-201ENST00000363674 87 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 SNORA48.1-201ENST00000390879 135 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 MTCYBP2-201ENST00000407745 171 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 AC009310.1-201ENST00000414414 451 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX39AO00148 AC073464.1-201ENST00000429823 534 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 CETN4P-201ENST00000432407 469 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 AC016632.1-201ENST00000503994 196 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.93□□□□□ -2.1
DDX39AO00148 GNAI2P1-201ENST00000541815 315 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.93□□□□□ -2.1
DDX39AO00148 AC136475.10-201ENST00000620253 385 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 AC005609.4-201ENST00000625071 447 ntBASIC1.93□□□□□ -2.1
DDX39AO00148 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
DDX39AO00148 RNU5A-6P-201ENST00000384136 116 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 AL358453.1-201ENST00000422522 250 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 MTCYBP8-201ENST00000422855 651 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.92□□□□□ -2.1
DDX39AO00148 RNU6-956P-201ENST00000458868 103 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX39AO00148 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
DDX39AO00148 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.92□□□□□ -2.1
DDX39AO00148 RNU2-44P-201ENST00000516795 194 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.92□□□□□ -2.1
DDX39AO00148 OSBPL9P5-201ENST00000542581 171 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 MIR3923-201ENST00000579521 83 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 MIR5583-1-201ENST00000580941 59 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.92□□□□□ -2.1
DDX39AO00148 AC004223.2-201ENST00000590309 544 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 AC073648.5-201ENST00000603502 305 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 RMST_6.1-201ENST00000611980 203 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 AL590240.4-201ENST00000616908 390 ntBASIC1.92□□□□□ -2.1
DDX39AO00148 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.92□□□□□ -2.1
DDX39AO00148 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
DDX39AO00148 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
DDX39AO00148 RNA5SP493-201ENST00000364115 91 ntBASIC1.91□□□□□ -2.1
DDX39AO00148 Y_RNA.332-201ENST00000365271 113 ntBASIC1.91□□□□□ -2.1
DDX39AO00148 RNU6-996P-201ENST00000365438 107 ntBASIC1.91□□□□□ -2.1
DDX39AO00148 SNORA26.3-201ENST00000391119 136 ntBASIC1.91□□□□□ -2.1
DDX39AO00148 SNORA17.3-201ENST00000391159 129 ntBASIC1.91□□□□□ -2.1
DDX39AO00148 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX39AO00148 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.91□□□□□ -2.1
DDX39AO00148 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX39AO00148 RPL23AP95-201ENST00000426806 265 ntBASIC1.91□□□□□ -2.1
DDX39AO00148 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms