Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-82P-201ENST00000363970 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-11P-201ENST00000364234 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.256-201ENST00000364594 104 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-25P-201ENST00000383873 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-1-201ENST00000383898 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-1083P-201ENST00000384022 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-48P-201ENST00000384161 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-36P-201ENST00000384172 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.450-201ENST00000384198 113 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-4P-201ENST00000384205 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-5P-201ENST00000384238 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-3P-201ENST00000384314 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-16P-201ENST00000384385 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-15P-201ENST00000384534 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-2-201ENST00000384627 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-29P-201ENST00000384637 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-9-201ENST00000384776 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-33P-201ENST00000384793 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-192P-201ENST00000391253 100 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 MTCO1P20-201ENST00000425366 358 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RPL30P4-201ENST00000429309 333 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORD13-201ENST00000459299 104 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL163540.1-201ENST00000485382 386 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC136619.2-201ENST00000563361 631 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 SUB1P3-201ENST00000564581 315 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 VN1R80P-201ENST00000597126 338 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-6P-201ENST00000606623 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-91P-201ENST00000607774 107 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 SCARNA4-202ENST00000625402 129 ntBASIC1.71□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.40-201ENST00000362645 93 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-529P-201ENST00000363383 104 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-487P-201ENST00000365430 104 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL606923.1-201ENST00000406616 190 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL117339.3-201ENST00000418733 162 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 USP9YP18-201ENST00000425912 695 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 MTND1P34-201ENST00000438556 671 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC092473.1-201ENST00000441098 221 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC082651.2-201ENST00000496833 166 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORA14.1-201ENST00000516113 141 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-1069P-201ENST00000516612 133 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 COPS8P3-201ENST00000526024 482 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AP003033.1-201ENST00000527244 415 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC010525.2-201ENST00000590920 195 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 BNIP3P25-201ENST00000596023 559 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL162413.1-201ENST00000603198 110 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC005034.5-201ENST00000604219 466 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC009233.1-201ENST00000616477 371 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 U4.5-201ENST00000617137 123 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC026585.1-201ENST00000619582 524 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR3688-2-201ENST00000636963 87 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC024614.3-201ENST00000637860 256 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC073869.6-201ENST00000640656 341 ntBASIC1.7□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL359854.1-201ENST00000614203 1594 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC138393.1-203ENST00000327086 343 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-457P-201ENST00000363999 107 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORA16.1-201ENST00000364597 132 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-534P-201ENST00000364877 106 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.480-201ENST00000384364 102 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORD116-20-201ENST00000384529 92 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 RAP1BP3-201ENST00000407180 549 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-1148P-201ENST00000410992 104 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 POLHP1-201ENST00000411806 470 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 UBE2V1P8-201ENST00000437166 265 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 FABP5P14-201ENST00000437273 393 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL121601.2-201ENST00000438019 707 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-1208P-201ENST00000459588 107 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 HMGN2P26-201ENST00000463169 339 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC018437.1-201ENST00000492214 406 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC091885.1-201ENST00000506658 268 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC008526.1-201ENST00000509149 338 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms