Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU6-17P-201ENST00000384245 107 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 RNU6-18P-201ENST00000384527 107 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 MIR628-201ENST00000385229 95 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AL356968.1-201ENST00000416622 474 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AL513477.1-202ENST00000417061 214 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AL590556.1-201ENST00000423231 483 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC002075.2-201ENST00000425207 252 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 TRIAP1P1-201ENST00000427062 225 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 OR2AQ1P-201ENST00000451972 200 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AP000705.1-201ENST00000454567 350 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 RPL23AP70-201ENST00000483361 460 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 RNA5SP341-201ENST00000516261 117 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC105245.1-201ENST00000581934 244 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC006504.6-201ENST00000590142 199 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 uc_338.1-201ENST00000612113 180 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC087588.2-201ENST00000617667 426 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 ZNF72P-201ENST00000425869 1908 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 AC080128.1-201ENST00000474389 1917 ntBASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
MBD3L4A6NDZ8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RNU6-222P-201ENST00000362438 107 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 Y_RNA.106-201ENST00000363189 100 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RNU6-639P-201ENST00000384074 107 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RNU6-1032P-201ENST00000384100 107 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RNA5SP229-201ENST00000410809 99 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AL353752.1-201ENST00000454946 260 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RPS3P1-201ENST00000456781 192 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AC145146.1-201ENST00000496370 254 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RNU6-1231P-201ENST00000517185 103 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 HSBP1P1-201ENST00000555205 166 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 RNVU1-4-201ENST00000612985 164 ntBASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
MBD3L4A6NDZ8 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 Y_RNA.319-201ENST00000365138 92 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 Y_RNA.358-201ENST00000365491 99 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC117470.1-201ENST00000381974 330 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 Y_RNA.422-201ENST00000384054 114 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 U8.10-201ENST00000384260 133 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 MIR487A-201ENST00000385009 80 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 RNU6-1093P-201ENST00000391194 107 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 MRPL42P3-201ENST00000401492 326 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 USP9YP16-201ENST00000430287 407 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 MICF-203ENST00000432679 129 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 USP9YP23-201ENST00000455085 407 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC021205.2-201ENST00000480069 347 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 ANXA2P1-201ENST00000505539 926 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC023141.11-201ENST00000508864 202 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 RNU4-77P-201ENST00000516692 156 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC006600.1-201ENST00000572529 153 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 MIR2682-201ENST00000580305 110 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AC069294.1-201ENST00000608397 350 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AL132822.1-201ENST00000617063 513 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AL138825.1-201ENST00000618587 192 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 AL606534.2-204ENST00000635008 178 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 MIR4272-201ENST00000635924 64 ntBASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.87□□□□□ -1.95
MBD3L4A6NDZ8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 AC005592.1-201ENST00000566527 1640 ntBASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 AC026241.1-201ENST00000517873 2142 ntBASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 RNU4-15P-201ENST00000362613 141 ntBASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 RN7SKP220-201ENST00000410611 288 ntBASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 AC114482.1-201ENST00000418010 247 ntBASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
MBD3L4A6NDZ8 CHEK2P4-201ENST00000450340 246 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms